BLASTX nr result

ID: Glycyrrhiza23_contig00034459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034459
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524045.1| PREDICTED: RINT1-like protein-like [Glycine ...   213   1e-53
ref|XP_003622992.1| RAD50-interacting protein [Medicago truncatu...   210   8e-53
ref|XP_003532305.1| PREDICTED: RINT1-like protein-like [Glycine ...   209   1e-52
ref|XP_002511554.1| conserved hypothetical protein [Ricinus comm...   157   7e-37
emb|CBI15247.3| unnamed protein product [Vitis vinifera]              157   1e-36

>ref|XP_003524045.1| PREDICTED: RINT1-like protein-like [Glycine max]
          Length = 796

 Score =  213 bits (542), Expect = 1e-53
 Identities = 100/115 (86%), Positives = 111/115 (96%)
 Frame = +3

Query: 3   LQRISSLSVFCDRPDWLDLWAEIELGDALDKLRPDIEDENNWRKKVEGVVLSSCSDDHKS 182
           +Q+ISSLSVFCDRPDWLDLWAEIELGD LDKL+PDI+DENNWRKKVEGVVLSS +DDHKS
Sbjct: 429 MQKISSLSVFCDRPDWLDLWAEIELGDVLDKLKPDIQDENNWRKKVEGVVLSSYTDDHKS 488

Query: 183 PLVSSAFVHHLASVVERCRSLPSVTLRSKFLRLVGVPIIRNFFDSILIRCQEAEG 347
           PLVS+AF+ HLASV++RCRSLPSV+LRSKFLRL G+PIIRNFFDSILIRCQEAEG
Sbjct: 489 PLVSNAFLRHLASVIDRCRSLPSVSLRSKFLRLAGIPIIRNFFDSILIRCQEAEG 543


>ref|XP_003622992.1| RAD50-interacting protein [Medicago truncatula]
           gi|355498007|gb|AES79210.1| RAD50-interacting protein
           [Medicago truncatula]
          Length = 801

 Score =  210 bits (535), Expect = 8e-53
 Identities = 103/115 (89%), Positives = 108/115 (93%)
 Frame = +3

Query: 3   LQRISSLSVFCDRPDWLDLWAEIELGDALDKLRPDIEDENNWRKKVEGVVLSSCSDDHKS 182
           LQRISSLSVFCDRPDWLDLWAEIELGDALDKL+PDIE+ENNWRKK+E V LSS  DDHKS
Sbjct: 434 LQRISSLSVFCDRPDWLDLWAEIELGDALDKLKPDIENENNWRKKIESVALSSNIDDHKS 493

Query: 183 PLVSSAFVHHLASVVERCRSLPSVTLRSKFLRLVGVPIIRNFFDSILIRCQEAEG 347
           PLVSSAFV HLASVVERCRSLP+VTLRSKFLRLVGVPIIR F DSIL+RCQEAEG
Sbjct: 494 PLVSSAFVRHLASVVERCRSLPNVTLRSKFLRLVGVPIIRKFSDSILVRCQEAEG 548


>ref|XP_003532305.1| PREDICTED: RINT1-like protein-like [Glycine max]
          Length = 796

 Score =  209 bits (533), Expect = 1e-52
 Identities = 99/115 (86%), Positives = 109/115 (94%)
 Frame = +3

Query: 3   LQRISSLSVFCDRPDWLDLWAEIELGDALDKLRPDIEDENNWRKKVEGVVLSSCSDDHKS 182
           +Q+ISSLSVFCDRPDWLDLWAEIELGDAL KL+PDI+DENNWRKKVEGVVLSS +DDHKS
Sbjct: 429 MQKISSLSVFCDRPDWLDLWAEIELGDALGKLKPDIQDENNWRKKVEGVVLSSYTDDHKS 488

Query: 183 PLVSSAFVHHLASVVERCRSLPSVTLRSKFLRLVGVPIIRNFFDSILIRCQEAEG 347
           PL+S+AF+ HLASV++RCRSLPSV LRSKFLR  GVPIIRNFFDSILIRCQEAEG
Sbjct: 489 PLISNAFLRHLASVIDRCRSLPSVILRSKFLRFAGVPIIRNFFDSILIRCQEAEG 543


>ref|XP_002511554.1| conserved hypothetical protein [Ricinus communis]
           gi|223550669|gb|EEF52156.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 799

 Score =  157 bits (398), Expect = 7e-37
 Identities = 70/115 (60%), Positives = 94/115 (81%)
 Frame = +3

Query: 3   LQRISSLSVFCDRPDWLDLWAEIELGDALDKLRPDIEDENNWRKKVEGVVLSSCSDDHKS 182
           LQ+ISSLSVF DRPDWLDLW E+EL + L+KL+P ++DE NW  K++G    S  +++KS
Sbjct: 432 LQKISSLSVFGDRPDWLDLWTELELSETLEKLKPVVDDERNWTTKIQGAAPLSGPENYKS 491

Query: 183 PLVSSAFVHHLASVVERCRSLPSVTLRSKFLRLVGVPIIRNFFDSILIRCQEAEG 347
           P+VS+AF+ HL+ VV+RCRSLPS +LRS+FLRLVG P+++ F D +L+RCQEAEG
Sbjct: 492 PMVSTAFIWHLSLVVDRCRSLPSTSLRSRFLRLVGAPVLQRFLDCVLLRCQEAEG 546


>emb|CBI15247.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/115 (63%), Positives = 91/115 (79%)
 Frame = +3

Query: 3   LQRISSLSVFCDRPDWLDLWAEIELGDALDKLRPDIEDENNWRKKVEGVVLSSCSDDHKS 182
           LQ+ISSLSVFCDRPDWLDLWA+IEL D LDKL+ ++ED  NW  KV+G VL    +D++S
Sbjct: 376 LQKISSLSVFCDRPDWLDLWAKIELDDVLDKLKLEMEDRKNWTMKVQGAVLLPGPEDYRS 435

Query: 183 PLVSSAFVHHLASVVERCRSLPSVTLRSKFLRLVGVPIIRNFFDSILIRCQEAEG 347
           P +SS F+  L++VV+RCR+LPSV+L S+F RL G PII  F D IL+RCQEAEG
Sbjct: 436 PAISSVFLQRLSAVVDRCRALPSVSLSSRFARLSGAPIIHKFLDCILLRCQEAEG 490


Top