BLASTX nr result

ID: Glycyrrhiza23_contig00034450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034450
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637285.1| ABC transporter C family member [Medicago tr...   138   5e-31
ref|XP_002304728.1| multidrug resistance protein ABC transporter...    79   4e-13
ref|XP_004160352.1| PREDICTED: ABC transporter C family member 1...    60   2e-07
ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1...    60   2e-07

>ref|XP_003637285.1| ABC transporter C family member [Medicago truncatula]
           gi|355503220|gb|AES84423.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1539

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/74 (85%), Positives = 66/74 (89%)
 Frame = -1

Query: 223 FVGYHKWFHSYSELLVWANIILFTKCASSHCIVFNRVLCFWWILKPTLGVFHLITKFPSL 44
           FVGYH+W HS SELLVWANIILFTKCAS HCIVFNRVLCFWWIL P LG+FHLIT FPSL
Sbjct: 109 FVGYHRWLHSCSELLVWANIILFTKCASIHCIVFNRVLCFWWILNPILGIFHLITNFPSL 168

Query: 43  EVSVRIMESLVVLL 2
           EVS  IMESLVVL+
Sbjct: 169 EVSACIMESLVVLM 182


>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1426

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/74 (47%), Positives = 47/74 (63%)
 Frame = -1

Query: 223 FVGYHKWFHSYSELLVWANIILFTKCASSHCIVFNRVLCFWWILKPTLGVFHLITKFPSL 44
           F+ YH+W    S+L+VW  II+ + CA  H +  NR LCFWWI+K  LG+ HL   F S+
Sbjct: 40  FIAYHEWLFRSSQLIVWTVIIISSMCACLHDVFCNRFLCFWWIMKSLLGILHLHRAFGSM 99

Query: 43  EVSVRIMESLVVLL 2
           EV   + +S VVLL
Sbjct: 100 EVVKCLKDSCVVLL 113


>ref|XP_004160352.1| PREDICTED: ABC transporter C family member 13-like [Cucumis
           sativus]
          Length = 988

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/73 (34%), Positives = 40/73 (54%)
 Frame = -1

Query: 220 VGYHKWFHSYSELLVWANIILFTKCASSHCIVFNRVLCFWWILKPTLGVFHLITKFPSLE 41
           V YH+W  + S L VW    +F  C++   I  N++LC WWI++   G+F  ++ +   E
Sbjct: 55  VEYHEWLSTSSLLAVWIFTSIFANCSNFEHIFNNKMLCLWWIVRAIFGIFIFVSTYADFE 114

Query: 40  VSVRIMESLVVLL 2
           +   +  S VVLL
Sbjct: 115 ILKTVNSSFVVLL 127


>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis
           sativus]
          Length = 2377

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/73 (34%), Positives = 40/73 (54%)
 Frame = -1

Query: 220 VGYHKWFHSYSELLVWANIILFTKCASSHCIVFNRVLCFWWILKPTLGVFHLITKFPSLE 41
           V YH+W  + S L VW    +F  C++   I  N++LC WWI++   G+F  ++ +   E
Sbjct: 55  VEYHEWLSTSSLLAVWIFTSIFANCSNFEHIFNNKMLCLWWIVRAIFGIFIFVSTYADFE 114

Query: 40  VSVRIMESLVVLL 2
           +   +  S VVLL
Sbjct: 115 ILKTVNSSFVVLL 127


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