BLASTX nr result

ID: Glycyrrhiza23_contig00034446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034446
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533085.1| PREDICTED: F-box/LRR-repeat protein 2-like [...   171   6e-41
ref|XP_003604291.1| F-box/LRR-repeat protein [Medicago truncatul...   144   1e-32
ref|XP_003529785.1| PREDICTED: F-box protein At-B-like [Glycine ...    71   8e-11
ref|XP_003603672.1| F-box/LRR-repeat protein [Medicago truncatul...    70   2e-10
ref|XP_003604837.1| F-box/LRR-repeat protein [Medicago truncatul...    65   4e-09

>ref|XP_003533085.1| PREDICTED: F-box/LRR-repeat protein 2-like [Glycine max]
          Length = 559

 Score =  171 bits (433), Expect = 6e-41
 Identities = 86/104 (82%), Positives = 94/104 (90%)
 Frame = -2

Query: 314 SIVEISFFTCFKITQVGIASAIRVRPSLTSISFNIEKKRIHGPGLTPLPINLDLIDSFRS 135
           S+ EISFFTCFKITQ+GIASAIR+RP L SISFNIEKKRIHGPGLT  PI+LDLIDSF S
Sbjct: 196 SLQEISFFTCFKITQLGIASAIRLRPGLNSISFNIEKKRIHGPGLTLAPIDLDLIDSFSS 255

Query: 134 LKSLTAIDLSNSFISDEFLFSVADGCGPLLKKLVLQDCCNCTFS 3
           LK LTAIDLSNS ISDEFLF+VA+G G LLKKL+LQ+CCNCTFS
Sbjct: 256 LKRLTAIDLSNSVISDEFLFAVAEGGGLLLKKLILQNCCNCTFS 299


>ref|XP_003604291.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355505346|gb|AES86488.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 538

 Score =  144 bits (362), Expect = 1e-32
 Identities = 74/85 (87%), Positives = 78/85 (91%)
 Frame = -2

Query: 314 SIVEISFFTCFKITQVGIASAIRVRPSLTSISFNIEKKRIHGPGLTPLPINLDLIDSFRS 135
           S+ EISFF CFKI+Q GIASAIR+RPSL+SISFNIEKKRIHGPGLTPLPINLDLIDSF S
Sbjct: 196 SLEEISFFQCFKISQDGIASAIRMRPSLSSISFNIEKKRIHGPGLTPLPINLDLIDSFVS 255

Query: 134 LKSLTAIDLSNSFISDEFLFSVADG 60
           LK L AIDLSNSFISDEFL SVADG
Sbjct: 256 LKRLNAIDLSNSFISDEFLISVADG 280


>ref|XP_003529785.1| PREDICTED: F-box protein At-B-like [Glycine max]
          Length = 577

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 50/103 (48%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
 Frame = -2

Query: 305 EISFFTCFKITQVGIASAIRVRPSLTSI---SFNIEKKRIHGPGLTPLPINLDLIDSFRS 135
           +++ F C  ITQ GIASAIR RP L S    +F    K+  G  L P  +  D I +  S
Sbjct: 208 QVTIFECHFITQRGIASAIRERPCLRSFRVSNFGCGTKK--GDFLRP-SVTSDFITALVS 264

Query: 134 LKSLTAIDLSNSFISDEFLFSVADGCGPLLKKLVLQDCCNCTF 6
           LK LT +DLS S ISDE L  VA+  G  LKKLVLQ CCN ++
Sbjct: 265 LKGLTCLDLSCSSISDELLCCVAEE-GIPLKKLVLQGCCNYSY 306


>ref|XP_003603672.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355492720|gb|AES73923.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 592

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/101 (41%), Positives = 60/101 (59%)
 Frame = -2

Query: 305 EISFFTCFKITQVGIASAIRVRPSLTSISFNIEKKRIHGPGLTPLPINLDLIDSFRSLKS 126
           ++  F C +IT  G+ SA+R RP+LTS+SF+             +  N+  IDS  SLK 
Sbjct: 275 DVIMFDCDQITNAGVTSALRERPTLTSLSFSTTPN-------NSVFNNIHFIDSLVSLKG 327

Query: 125 LTAIDLSNSFISDEFLFSVADGCGPLLKKLVLQDCCNCTFS 3
           LT++DL    ISDE L+S+A   G LLK+LVLQ C   +++
Sbjct: 328 LTSLDLKRLKISDELLYSIARE-GLLLKRLVLQICTGYSYA 367


>ref|XP_003604837.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355505892|gb|AES87034.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 560

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 45/100 (45%), Positives = 58/100 (58%)
 Frame = -2

Query: 305 EISFFTCFKITQVGIASAIRVRPSLTSISFNIEKKRIHGPGLTPLPINLDLIDSFRSLKS 126
           EI    C  IT  G+ASAI  RP L S+SF+  K R+ G G   +      IDS   LK 
Sbjct: 214 EIVMLKCSFITHYGVASAICERPGLKSLSFS--KLRLFGIGNHNI-----FIDSLVKLKG 266

Query: 125 LTAIDLSNSFISDEFLFSVADGCGPLLKKLVLQDCCNCTF 6
           LT +DLS S+ISD  L S+A+   P L+KLVLQ C + ++
Sbjct: 267 LTCLDLSYSYISDRLLSSIAEKGFP-LRKLVLQGCLDYSY 305


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