BLASTX nr result

ID: Glycyrrhiza23_contig00034434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034434
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553650.1| PREDICTED: ABC transporter C family member 4...   115   3e-24
ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4...   114   8e-24
ref|XP_002301476.1| multidrug resistance protein ABC transporter...   110   2e-22
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   108   4e-22
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   105   5e-21

>ref|XP_003553650.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1504

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/66 (86%), Positives = 60/66 (90%)
 Frame = -3

Query: 198 TAVEVKDGIFSWDDDKQHKDLKNINLEIKKGELTAIVGTVGSGKSSLLASILGEMRKIYG 19
           TAVE+ DG FSWDDD   +DLKN+NLEIKKGELTAIVGTVGSGKSSLLASILGEMRKI G
Sbjct: 640 TAVEIIDGTFSWDDDNMQQDLKNVNLEIKKGELTAIVGTVGSGKSSLLASILGEMRKISG 699

Query: 18  KVRVCG 1
           KVRVCG
Sbjct: 700 KVRVCG 705


>ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/66 (87%), Positives = 60/66 (90%)
 Frame = -3

Query: 198 TAVEVKDGIFSWDDDKQHKDLKNINLEIKKGELTAIVGTVGSGKSSLLASILGEMRKIYG 19
           TAVEVKDG FSWDDD Q KDLKNINL+I KGELTAIVGTVGSGKSSLLASILGEM KI G
Sbjct: 634 TAVEVKDGTFSWDDDGQLKDLKNINLKINKGELTAIVGTVGSGKSSLLASILGEMHKISG 693

Query: 18  KVRVCG 1
           KV+VCG
Sbjct: 694 KVQVCG 699


>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1508

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/65 (83%), Positives = 59/65 (90%)
 Frame = -3

Query: 195 AVEVKDGIFSWDDDKQHKDLKNINLEIKKGELTAIVGTVGSGKSSLLASILGEMRKIYGK 16
           AV++KDG+FSWDD+ +   LKNINLEIKKGELTAIVGTVGSGKSSLLASILGEM KI GK
Sbjct: 642 AVQIKDGVFSWDDETEDDVLKNINLEIKKGELTAIVGTVGSGKSSLLASILGEMHKISGK 701

Query: 15  VRVCG 1
           VRVCG
Sbjct: 702 VRVCG 706


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223537625|gb|EEF39248.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  108 bits (270), Expect = 4e-22
 Identities = 53/65 (81%), Positives = 58/65 (89%)
 Frame = -3

Query: 195 AVEVKDGIFSWDDDKQHKDLKNINLEIKKGELTAIVGTVGSGKSSLLASILGEMRKIYGK 16
           AVE+KDG FSWDD+ + + LKNIN EIKKGELTAIVGTVGSGKSSLLAS+LGEM KI GK
Sbjct: 640 AVEIKDGSFSWDDESEDEVLKNINFEIKKGELTAIVGTVGSGKSSLLASVLGEMHKISGK 699

Query: 15  VRVCG 1
           VRVCG
Sbjct: 700 VRVCG 704


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/65 (80%), Positives = 58/65 (89%)
 Frame = -3

Query: 195 AVEVKDGIFSWDDDKQHKDLKNINLEIKKGELTAIVGTVGSGKSSLLASILGEMRKIYGK 16
           AVEVK GIFSWDD+ + + L NINLEIKKG+LTAIVGTVGSGKSSLLASILGEM KI GK
Sbjct: 641 AVEVKGGIFSWDDEAKGEVLNNINLEIKKGKLTAIVGTVGSGKSSLLASILGEMHKISGK 700

Query: 15  VRVCG 1
           +R+CG
Sbjct: 701 IRICG 705


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