BLASTX nr result

ID: Glycyrrhiza23_contig00034379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034379
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...   134   8e-30
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...   134   8e-30
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]       128   4e-28
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]      127   9e-28
gb|ABE88097.1| Reverse transcriptase (RNA-dependent DNA polymera...   125   4e-27

>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/88 (75%), Positives = 77/88 (87%)
 Frame = -3

Query: 264  FTALLVYVDYVILAGNSLEEFARIKSILDISFKIKDLGKLKYFLGLEVAHS*QGITICQR 85
            FTALLVYVD +ILAG+S++EF RIK++LD++FKIK+LGKLKYFLGLEVAHS  GITI QR
Sbjct: 1090 FTALLVYVDDIILAGDSIDEFDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRLGITISQR 1149

Query: 84   KYCLDLPNDSGFLGSKPAKTPLDPAVKL 1
            KYCLDL  DSG LG KPA TPLD ++KL
Sbjct: 1150 KYCLDLLKDSGLLGCKPASTPLDTSIKL 1177


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/88 (75%), Positives = 77/88 (87%)
 Frame = -3

Query: 264  FTALLVYVDYVILAGNSLEEFARIKSILDISFKIKDLGKLKYFLGLEVAHS*QGITICQR 85
            FTALLVYVD +ILAG+S++EF RIK++LD++FKIK+LGKLKYFLGLEVAHS  GITI QR
Sbjct: 926  FTALLVYVDDIILAGDSIDEFDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRLGITISQR 985

Query: 84   KYCLDLPNDSGFLGSKPAKTPLDPAVKL 1
            KYCLDL  DSG LG KPA TPLD ++KL
Sbjct: 986  KYCLDLLKDSGLLGCKPASTPLDTSIKL 1013


>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/88 (72%), Positives = 72/88 (81%)
 Frame = -3

Query: 264 FTALLVYVDYVILAGNSLEEFARIKSILDISFKIKDLGKLKYFLGLEVAHS*QGITICQR 85
           FT +LVYVD +ILAGNSL EF  IK+ L  +FKIKDLG LKYFLGLEVAHS  GI++CQR
Sbjct: 286 FTIILVYVDDIILAGNSLTEFHIIKNALHQAFKIKDLGILKYFLGLEVAHSHSGISLCQR 345

Query: 84  KYCLDLPNDSGFLGSKPAKTPLDPAVKL 1
           KYCLDL NDSG LGSKP  TP DP++KL
Sbjct: 346 KYCLDLLNDSGLLGSKPVSTPSDPSIKL 373


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score =  127 bits (319), Expect = 9e-28
 Identities = 64/88 (72%), Positives = 71/88 (80%)
 Frame = -3

Query: 264  FTALLVYVDYVILAGNSLEEFARIKSILDISFKIKDLGKLKYFLGLEVAHS*QGITICQR 85
            FT LLVYVD +ILAGNSL EF  IK IL  SFKIKDLG+LKYFLGLEVAHS QGI++CQR
Sbjct: 982  FTILLVYVDDIILAGNSLSEFQNIKDILHQSFKIKDLGQLKYFLGLEVAHSKQGISLCQR 1041

Query: 84   KYCLDLPNDSGFLGSKPAKTPLDPAVKL 1
            KYCLDL  DSG + SKP  TP D ++KL
Sbjct: 1042 KYCLDLLADSGLVNSKPVSTPSDRSIKL 1069


>gb|ABE88097.1| Reverse transcriptase (RNA-dependent DNA polymerase) [Medicago
           truncatula]
          Length = 293

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/91 (67%), Positives = 72/91 (79%)
 Frame = -3

Query: 273 NGDFTALLVYVDYVILAGNSLEEFARIKSILDISFKIKDLGKLKYFLGLEVAHS*QGITI 94
           +  FT LLVYVD VILAG++L EF  IK +L  +FKIKD+G+LKYFLGLEVAHS  GI++
Sbjct: 168 HSSFTILLVYVDDVILAGDTLSEFNTIKGVLHDAFKIKDIGQLKYFLGLEVAHSKSGISL 227

Query: 93  CQRKYCLDLPNDSGFLGSKPAKTPLDPAVKL 1
           CQRKYCLDL  DSG  GSKP  TP DP++KL
Sbjct: 228 CQRKYCLDLLEDSGLTGSKPMNTPSDPSIKL 258


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