BLASTX nr result

ID: Glycyrrhiza23_contig00034371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034371
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a...   149   2e-34
ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicag...   141   5e-32
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...   110   1e-22
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...    98   8e-19
emb|CBI20740.3| unnamed protein product [Vitis vinifera]               98   8e-19

>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/94 (80%), Positives = 82/94 (87%)
 Frame = +1

Query: 1   QILELENILDSQRYTVEDRKEMDGCIHSAKESCRYYDQARFPALSLKPKIEALWLKSDEL 180
           QI ELE+ILDSQRYTVEDR EMD C+ SAKESCRYYDQARF ALSLKPKIEAL  K D L
Sbjct: 245 QISELESILDSQRYTVEDRTEMDRCVPSAKESCRYYDQARFSALSLKPKIEALSFKFDAL 304

Query: 181 LSEFQSKYKDVDNKFKTLHQKMSNELAKILYCLD 282
           LSE QS YKDV+NKFKTL Q+MSNELAKIL+CL+
Sbjct: 305 LSENQSNYKDVENKFKTLSQRMSNELAKILHCLE 338


>ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
           gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like
           protein [Medicago truncatula]
          Length = 1758

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/94 (75%), Positives = 78/94 (82%)
 Frame = +1

Query: 1   QILELENILDSQRYTVEDRKEMDGCIHSAKESCRYYDQARFPALSLKPKIEALWLKSDEL 180
           QI +LENILDS+ Y V+DR EMD  I SAKESCR+YD ARF ALSLKPKIEA W K D L
Sbjct: 229 QISDLENILDSRSYVVKDRTEMDVYIPSAKESCRFYDPARFHALSLKPKIEASWSKCDVL 288

Query: 181 LSEFQSKYKDVDNKFKTLHQKMSNELAKILYCLD 282
           LSEFQS YKD+D KFK LHQ+MSNELAKILYCL+
Sbjct: 289 LSEFQSDYKDMDQKFKALHQRMSNELAKILYCLE 322


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/98 (54%), Positives = 73/98 (74%), Gaps = 4/98 (4%)
 Frame = +1

Query: 1   QILELENILDSQRYTVEDRKEMDGCIHSAKESCRYYDQARFPALSLKPKIEALWLKSDEL 180
           Q+ ELE +LDS  YT+EDR EM+ C+ SAKESCR++D A+F +L LK K+EA WLK+D  
Sbjct: 224 QMSELECVLDSLIYTIEDRTEMEACVPSAKESCRFFDPAQFSSLDLKAKVEASWLKTDGS 283

Query: 181 LSEFQS----KYKDVDNKFKTLHQKMSNELAKILYCLD 282
           LS  QS     +KD+D+K K L +++SN+ AK+L+CLD
Sbjct: 284 LSNLQSSLQTSHKDMDDKLKNLRKRLSNDHAKVLHCLD 321


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/98 (52%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
 Frame = +1

Query: 1   QILELENILDSQRYTVEDRKEMDGCIHSAKESCRYYDQARFPALSLKPKIEALWLKSDEL 180
           QI ELE+ILD Q YT+EDR E++  I SAKE  R+YD ++F  L LK K+++ W K D L
Sbjct: 225 QISELESILDCQIYTIEDRTELEVFIPSAKEINRFYDASQFHNLDLKAKLKSSWSKFDNL 284

Query: 181 LSEFQ----SKYKDVDNKFKTLHQKMSNELAKILYCLD 282
           L   Q    ++YKD+D+K K L +++SN+ AKILYCLD
Sbjct: 285 LLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLD 322


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/98 (52%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
 Frame = +1

Query: 1   QILELENILDSQRYTVEDRKEMDGCIHSAKESCRYYDQARFPALSLKPKIEALWLKSDEL 180
           QI ELE+ILD Q YT+EDR E++  I SAKE  R+YD ++F  L LK K+++ W K D L
Sbjct: 233 QISELESILDCQIYTIEDRTELEVFIPSAKEINRFYDASQFHNLDLKAKLKSSWSKFDNL 292

Query: 181 LSEFQ----SKYKDVDNKFKTLHQKMSNELAKILYCLD 282
           L   Q    ++YKD+D+K K L +++SN+ AKILYCLD
Sbjct: 293 LLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLD 330


Top