BLASTX nr result

ID: Glycyrrhiza23_contig00034361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034361
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein A...    60   1e-07
ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812...    60   1e-07
ref|XP_003521927.1| PREDICTED: uncharacterized protein LOC100811...    60   1e-07
ref|XP_002328901.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|YP_006666138.1| RnaseH (mitochondrion) [Malus x domestica] g...    39   3e-06

>ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 192

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = -2

Query: 363 WSRPPQVEVKMNCDATVCDLGSKSSAGGVLRDGDGTFILGFA-SILSPRNVMQAELHAIL 187
           W+ PP+   K+NCD      G+K +AGGVLRD  G FILGF+ +++   + ++AEL AI 
Sbjct: 30  WTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIK 89

Query: 186 IGLKPARLKGLGKWILK 136
           IG++    +G    I++
Sbjct: 90  IGMQTVVARGYRNLIVE 106


>ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812157 [Glycine max]
          Length = 551

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = -2

Query: 363 WSRPPQVEVKMNCDATVCDLGSKSSAGGVLRDGDGTFILGFA-SILSPRNVMQAELHAIL 187
           W+ PP+   K+NCD      G+K +AGGVLRD  G FILGF+ +++   + ++AEL AI 
Sbjct: 128 WTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIK 187

Query: 186 IGLKPARLKGLGKWILK 136
           IG++    +G    I++
Sbjct: 188 IGMQTVVARGYRNLIVE 204


>ref|XP_003521927.1| PREDICTED: uncharacterized protein LOC100811627 [Glycine max]
          Length = 445

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = -2

Query: 363 WSRPPQVEVKMNCDATVCDLGSKSSAGGVLRDGDGTFILGFA-SILSPRNVMQAELHAIL 187
           W+ PP+   K+NCD      G+K +AGGVLRD  G FILGF+ +++   + ++AEL AI 
Sbjct: 128 WTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIK 187

Query: 186 IGLKPARLKGLGKWILK 136
           IG++    +G    I++
Sbjct: 188 IGMQTVVARGYRNLIVE 204


>ref|XP_002328901.1| predicted protein [Populus trichocarpa] gi|222839331|gb|EEE77668.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/78 (42%), Positives = 47/78 (60%)
 Frame = -2

Query: 369 IKWSRPPQVEVKMNCDATVCDLGSKSSAGGVLRDGDGTFILGFASILSPRNVMQAELHAI 190
           I+W++PP   VK+N DA+   + SKSS  GV RD  G ++ GF+  +   +  +AEL A+
Sbjct: 49  IRWNKPPPGFVKLNTDASYKYISSKSSIAGVCRDEHGIWLFGFSCRVKSESAFEAELLAV 108

Query: 189 LIGLKPARLKGLGKWILK 136
              LK A  KGL K IL+
Sbjct: 109 REALKLAWDKGLKKVILE 126


>ref|YP_006666138.1| RnaseH (mitochondrion) [Malus x domestica]
           gi|401661941|emb|CBX33402.1| rnaseH (mitochondrion)
           [Malus x domestica]
          Length = 153

 Score = 38.9 bits (89), Expect(2) = 3e-06
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = -2

Query: 288 AGGVLRDGDGTFILGFASILSPRNVMQAELHAILIGLKPARLKG 157
           AGG+LRD +G +I GF + L    ++ AEL  +  GL+ A ++G
Sbjct: 10  AGGLLRDNNGNWISGFTANLGKGKIIAAELWGLFFGLRLAWMRG 53



 Score = 37.0 bits (84), Expect(2) = 3e-06
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = -1

Query: 166 VEGSWKVDFETDSLTVVCMIKEGCSSRHPLFNLISDIQDLLHLERGYSVDHVLRE 2
           + G   V+ E DS TVV ++ +  +S HPL  LI   Q  L ++    + H+ RE
Sbjct: 51  MRGFRSVEVEVDSATVVTLVNQQDNSLHPLHTLIRGCQAYLKMDWHCKLSHIYRE 105


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