BLASTX nr result

ID: Glycyrrhiza23_contig00034359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034359
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|3...   167   8e-40
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha [Glycin...   161   4e-38
emb|CBI37517.3| unnamed protein product [Vitis vinifera]              154   9e-36
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   154   9e-36
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   152   4e-35

>ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|355491701|gb|AES72904.1|
           DNA topoisomerase [Medicago truncatula]
          Length = 587

 Score =  167 bits (423), Expect = 8e-40
 Identities = 76/81 (93%), Positives = 78/81 (96%)
 Frame = +3

Query: 3   RLLDPGVGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSHDHRKLYELVVRHFLACVSKP 182
           RLLDPG GLWRNPRGGGHDD+AHPPIHPTKFSAGESGWS DHRKLYELVVRHFLACVSKP
Sbjct: 372 RLLDPGAGLWRNPRGGGHDDQAHPPIHPTKFSAGESGWSQDHRKLYELVVRHFLACVSKP 431

Query: 183 AVGAETTVEIDIAGELFSACG 245
           A+GAETTVEIDIAGE FSACG
Sbjct: 432 ALGAETTVEIDIAGERFSACG 452


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha [Glycine max]
          Length = 913

 Score =  161 bits (408), Expect = 4e-38
 Identities = 73/81 (90%), Positives = 77/81 (95%)
 Frame = +3

Query: 3   RLLDPGVGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSHDHRKLYELVVRHFLACVSKP 182
           RL+DP  GLWRNPRGGGHDDKAHPPI+PTKFS GESGWS DHRKLYELVVRHFLACVSKP
Sbjct: 368 RLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHRKLYELVVRHFLACVSKP 427

Query: 183 AVGAETTVEIDIAGELFSACG 245
           A+GAETTVEI+IAGELFSACG
Sbjct: 428 ALGAETTVEINIAGELFSACG 448


>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  154 bits (388), Expect = 9e-36
 Identities = 70/81 (86%), Positives = 74/81 (91%)
 Frame = +3

Query: 3   RLLDPGVGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSHDHRKLYELVVRHFLACVSKP 182
           RLLDPG GLWRNP  GGHDDKAHPPIHPTKFSAGESGWS DH++LYELVVRHFLACVS+P
Sbjct: 42  RLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYELVVRHFLACVSQP 101

Query: 183 AVGAETTVEIDIAGELFSACG 245
           AVGAET VEIDIAGE FS+ G
Sbjct: 102 AVGAETIVEIDIAGESFSSSG 122


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  154 bits (388), Expect = 9e-36
 Identities = 70/81 (86%), Positives = 74/81 (91%)
 Frame = +3

Query: 3   RLLDPGVGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSHDHRKLYELVVRHFLACVSKP 182
           RLLDPG GLWRNP  GGHDDKAHPPIHPTKFSAGESGWS DH++LYELVVRHFLACVS+P
Sbjct: 367 RLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYELVVRHFLACVSQP 426

Query: 183 AVGAETTVEIDIAGELFSACG 245
           AVGAET VEIDIAGE FS+ G
Sbjct: 427 AVGAETIVEIDIAGESFSSSG 447


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223533243|gb|EEF34998.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  152 bits (383), Expect = 4e-35
 Identities = 69/81 (85%), Positives = 73/81 (90%)
 Frame = +3

Query: 3   RLLDPGVGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSHDHRKLYELVVRHFLACVSKP 182
           RLLDPG GLWRNP  GGHDDKAHPPIHPTKFS GE+GWS DH ++YELVVRHFLACVS+P
Sbjct: 370 RLLDPGTGLWRNPSTGGHDDKAHPPIHPTKFSPGETGWSQDHHRVYELVVRHFLACVSQP 429

Query: 183 AVGAETTVEIDIAGELFSACG 245
           AVGAETTVEIDIAGE FSA G
Sbjct: 430 AVGAETTVEIDIAGEQFSASG 450


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