BLASTX nr result

ID: Glycyrrhiza23_contig00034351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034351
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containi...   287   7e-76
ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containi...   286   9e-76
gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]   284   5e-75
ref|XP_003594983.1| Pentatricopeptide repeat-containing protein ...   284   5e-75
ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi...   249   2e-64

>ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 608

 Score =  287 bits (734), Expect = 7e-76
 Identities = 137/150 (91%), Positives = 145/150 (96%)
 Frame = +1

Query: 1   GGALPNDITFVGLLSACVHAGLVAEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLY 180
           GGA PNDITFVGLLSACVHAGLV EGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLY
Sbjct: 416 GGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLY 475

Query: 181 EAWDLIEKMPEKPDKVTLGALHGACRRQKNVDIGERVMQMLLELDPSNSGNYIISSKIYA 360
           EAWDLIEKMPEKPDKVTLGAL GACR +KNVDIGERV++M+LE+DPSNSGNYIISSKIYA
Sbjct: 476 EAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYA 535

Query: 361 NLNMWDDSARMRALMREKGVTKTPGCSWIE 450
           NLNMW+DSARMR LMR+KG+TKTPGCSWIE
Sbjct: 536 NLNMWEDSARMRLLMRQKGITKTPGCSWIE 565


>ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score =  286 bits (733), Expect = 9e-76
 Identities = 137/150 (91%), Positives = 144/150 (96%)
 Frame = +1

Query: 1   GGALPNDITFVGLLSACVHAGLVAEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLY 180
           GGA PNDITFVGLLSACVHAGLV EGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLY
Sbjct: 422 GGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLY 481

Query: 181 EAWDLIEKMPEKPDKVTLGALHGACRRQKNVDIGERVMQMLLELDPSNSGNYIISSKIYA 360
           EAWDLI KMPEKPDKVTLGAL GACR +KNVDIGERVM+M+LE+DPSNSGNYIISSKIYA
Sbjct: 482 EAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYA 541

Query: 361 NLNMWDDSARMRALMREKGVTKTPGCSWIE 450
           NLNMW+DSARMR LMR+KG+TKTPGCSWIE
Sbjct: 542 NLNMWEDSARMRLLMRQKGITKTPGCSWIE 571


>gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 609

 Score =  284 bits (727), Expect = 5e-75
 Identities = 136/150 (90%), Positives = 142/150 (94%)
 Frame = +1

Query: 1   GGALPNDITFVGLLSACVHAGLVAEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLY 180
           G A PNDITFV LLSACVHAGLV EGYRLFDMMSTLFGLVPKIEHYSCMVDLL+RAGHLY
Sbjct: 417 GSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLY 476

Query: 181 EAWDLIEKMPEKPDKVTLGALHGACRRQKNVDIGERVMQMLLELDPSNSGNYIISSKIYA 360
           EAWD+IEKMPEKPD VTLGALH AC+R+KNVDIGERV+QMLLELDPSNSGNYIISSKIY 
Sbjct: 477 EAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYE 536

Query: 361 NLNMWDDSARMRALMREKGVTKTPGCSWIE 450
           NLNMWDD+ARMRALMRE GVTKTPGCSWIE
Sbjct: 537 NLNMWDDAARMRALMRENGVTKTPGCSWIE 566


>ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484031|gb|AES65234.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 702

 Score =  284 bits (727), Expect = 5e-75
 Identities = 136/150 (90%), Positives = 142/150 (94%)
 Frame = +1

Query: 1   GGALPNDITFVGLLSACVHAGLVAEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLY 180
           G A PNDITFV LLSACVHAGLV EGYRLFDMMSTLFGLVPKIEHYSCMVDLL+RAGHLY
Sbjct: 417 GSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLY 476

Query: 181 EAWDLIEKMPEKPDKVTLGALHGACRRQKNVDIGERVMQMLLELDPSNSGNYIISSKIYA 360
           EAWD+IEKMPEKPD VTLGALH AC+R+KNVDIGERV+QMLLELDPSNSGNYIISSKIY 
Sbjct: 477 EAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYE 536

Query: 361 NLNMWDDSARMRALMREKGVTKTPGCSWIE 450
           NLNMWDD+ARMRALMRE GVTKTPGCSWIE
Sbjct: 537 NLNMWDDAARMRALMRENGVTKTPGCSWIE 566


>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
           protein product [Vitis vinifera]
          Length = 618

 Score =  249 bits (635), Expect = 2e-64
 Identities = 116/151 (76%), Positives = 138/151 (91%), Gaps = 1/151 (0%)
 Frame = +1

Query: 1   GGAL-PNDITFVGLLSACVHAGLVAEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHL 177
           GGA+ PNDI+F+G+LSACVHAGLV EG +LFD+MS+ FGLVPKIEH+SCMVDLLARAGH+
Sbjct: 424 GGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHV 483

Query: 178 YEAWDLIEKMPEKPDKVTLGALHGACRRQKNVDIGERVMQMLLELDPSNSGNYIISSKIY 357
           +EAWD IEKMPEKPD+V LGAL GAC++++NVD+ ERVM MLLE++P NSGNYIISSKI+
Sbjct: 484 HEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIF 543

Query: 358 ANLNMWDDSARMRALMREKGVTKTPGCSWIE 450
           AN+  WDDSARMR LMR++GVTKTPGCSWIE
Sbjct: 544 ANMKRWDDSARMRVLMRQRGVTKTPGCSWIE 574


Top