BLASTX nr result

ID: Glycyrrhiza23_contig00034331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034331
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604634.1| hypothetical protein MTR_4g015340 [Medicago ...    72   5e-11
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...    70   2e-10
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    69   5e-10
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    68   9e-10
ref|XP_003599761.1| Peptide transporter PTR2 [Medicago truncatul...    67   2e-09

>ref|XP_003604634.1| hypothetical protein MTR_4g015340 [Medicago truncatula]
           gi|355505689|gb|AES86831.1| hypothetical protein
           MTR_4g015340 [Medicago truncatula]
          Length = 317

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
 Frame = -2

Query: 323 LYLPEFNINLISIPKLTRGSHFSVRFVNENCIIQDPLQRK-IGSGKLKHGLYHL-----D 162
           LY P FN+NLISI K+    +  V+F+ + CIIQD +  K IG      GLY L      
Sbjct: 183 LYSPNFNVNLISIAKIISSLNCYVKFLPDKCIIQDLITNKMIGLADPYGGLYKLRISPSA 242

Query: 161 YGGGKVVPVVSHVNATVDSSYT---------IPNSAIWHFRFGHASLAKIDMLSKNFPAI 9
           +     V  +SH N +++  Y          IP+SA+WHFR GH S  ++  +   +P+I
Sbjct: 243 FAFNSSVSHISHCNISINKDYQSFVSSSFTHIPDSALWHFRLGHLSNQRLSNMHSLYPSI 302

Query: 8   HV 3
            V
Sbjct: 303 CV 304


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
 Frame = -2

Query: 323 LYLPEFNINLISIPKLTRGSHFSVRFVNENCIIQDPLQRK-IGSGKLKHGLYHLDYGGGK 147
           LY+P F +NLIS+ +L   + +++ F +  C IQ+    K IG G+ + GLY+L     +
Sbjct: 447 LYVPTFTVNLISVSQLCHHTPYTLNFTDTICSIQEQKSLKMIGLGESRDGLYYLTQTNKE 506

Query: 146 VVPVVSHVNATVDSSYT--IPNSAIWHFRFGHASLAKIDMLSKNFPAI 9
                 ++++   S+    IP +AIWHFR GH S ++I +L   FP I
Sbjct: 507 CASSNYNISSIFSSANNVHIPENAIWHFRLGHLSSSRIALLHSQFPFI 554


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = -2

Query: 323 LYLPEFNINLISIPKLTRGSHFSVRFVNENCIIQDPLQRK-IGSGKLKHGLYHLDYGGGK 147
           L +P FN+NLIS  KL +  +  + F  + CI+QD +  K IGSGK + GLY++     K
Sbjct: 698 LCVPSFNLNLISASKLAKDQNCYIIFFPDYCILQDLVSGKMIGSGKQRGGLYYMHPSTNK 757

Query: 146 VVPVVSHVNATVDSSYTIPNSAIWHFRFGHASLAKIDMLSKNFPAIH 6
              VV HV+   D         +WH R GH S ++  +LS+  P IH
Sbjct: 758 --SVVFHVSQPSD---------LWHLRLGHPSFSRFKLLSRLLPDIH 793


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
 Frame = -2

Query: 323 LYLPEFNINLISIPKLTRGSHFSVRFVNENCIIQDPL-QRKIGSGKLKHGLYHLDYGGGK 147
           LY+PEF +NL+S+ + T+     + F  + C+IQDP+ ++KIG G    GLY LD    +
Sbjct: 502 LYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRGNQIGGLYVLDTSSVE 561

Query: 146 VVPVVSHVNATVDSSY---TIPNSAIWHFRFGHASLAKIDML 30
              V   +N++V        + +SA+WH R GH S  K D+L
Sbjct: 562 CTSV--DINSSVTEKQYCNAVVDSALWHSRLGHPSYEKNDVL 601


>ref|XP_003599761.1| Peptide transporter PTR2 [Medicago truncatula]
           gi|355488809|gb|AES70012.1| Peptide transporter PTR2
           [Medicago truncatula]
          Length = 1194

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
 Frame = -2

Query: 323 LYLPEFNINLISIPKLTRGSHFSVRFVNENCIIQD-PLQRKIGSGKLKHGLYHLDYGGGK 147
           LY P F +NLIS+ KL +   + V F+ + C+I D   Q+ IG   L  GLY L+     
Sbjct: 608 LYSPHFKVNLISVSKLIQVLSYQVNFLLDKCVIHDMKSQKMIGLCSLCDGLYRLNTASCS 667

Query: 146 VVPVVSHVNATVDSSYTIPNSAIWHFRFGHASLAKIDMLSKNFPAIHV 3
               VS + +   +   IP++AIWHFR GH S  ++  + + + +I V
Sbjct: 668 QESSVSSLTSHSSTISFIPSNAIWHFRLGHLSNQRLSKMHQLYFSISV 715


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