BLASTX nr result

ID: Glycyrrhiza23_contig00034322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034322
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medica...   220   1e-55
ref|XP_003534814.1| PREDICTED: uncharacterized protein LOC100816...   140   1e-31
ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816...   124   1e-26
ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258...    55   5e-06
emb|CAN76673.1| hypothetical protein VITISV_011790 [Vitis vinifera]    55   5e-06

>ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medicago truncatula]
            gi|355510828|gb|AES91970.1| Pre-mRNA polyadenylation
            factor fip1 [Medicago truncatula]
          Length = 1110

 Score =  220 bits (560), Expect = 1e-55
 Identities = 106/150 (70%), Positives = 124/150 (82%)
 Frame = +3

Query: 3    DKKECFFEQRTLMEYNEDSDWHPASRKHYIDDDPSLLSYRESRQFLPKHSSFPAKERETQ 182
            DK+E FFE+RTL++YNED DW PASRK Y+DDD SLLSYRESRQF  +HSSFPAK+RE Q
Sbjct: 596  DKREYFFERRTLIKYNEDDDWDPASRKLYLDDDLSLLSYRESRQFHSRHSSFPAKDREAQ 655

Query: 183  RRRMHHNPHFKDRNCNNDPRSDECEFEFLNRSYRMPSSFAEREMESLNNKHEEQFPQIDR 362
            R+ MHH  HFKDRNC++D   D+ EFEFLN+ YR PSSFAEREMESLNN+HEEQF QIDR
Sbjct: 656  RQIMHHRRHFKDRNCDSDQWFDD-EFEFLNKIYRTPSSFAEREMESLNNRHEEQFLQIDR 714

Query: 363  ELKRYAGRGRHHNRLPLVLDTLWSGKPEDE 452
              +RY GRGRH +R+ L +DT WSG+ EDE
Sbjct: 715  AQERYTGRGRHPDRVSLDVDTPWSGRTEDE 744


>ref|XP_003534814.1| PREDICTED: uncharacterized protein LOC100816396 [Glycine max]
          Length = 1121

 Score =  140 bits (353), Expect = 1e-31
 Identities = 82/155 (52%), Positives = 102/155 (65%), Gaps = 4/155 (2%)
 Frame = +3

Query: 3    DKKECFFEQRTLMEYNEDS--DWHPASRKHYIDDDPSLLSYRESRQFLPKHSSFPAKERE 176
            D ++ FFE       +ED   DW+    + Y  DD S  SYRESR+F PKHSSFP +ER 
Sbjct: 636  DVEDYFFEPGPRFADSEDRERDWYHLGCE-YSSDDLSPCSYRESRKFPPKHSSFPDEERY 694

Query: 177  TQRRRMHHNPHFKDRNCNNDPRSDECEFEFLNRSYRMPSSFAEREMESLNNKHEEQFPQI 356
            TQ +RM    HF DRNC +D   DECEF+FLN+SYRM S+ AERE+E L+N  EEQFP I
Sbjct: 695  TQGKRMDGKSHFIDRNCIDD--FDECEFKFLNKSYRM-STIAERELEFLDNYREEQFPHI 751

Query: 357  DRELKRYAGRGRHHNRLPLVLDTLWSG--KPEDEC 455
            DR+ +R   RGRH++  PLVL+ L SG  + ED C
Sbjct: 752  DRDWRRSVCRGRHYDSPPLVLNNLCSGIMEVEDNC 786


>ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816009 [Glycine max]
          Length = 1098

 Score =  124 bits (310), Expect = 1e-26
 Identities = 74/138 (53%), Positives = 88/138 (63%), Gaps = 2/138 (1%)
 Frame = +3

Query: 48   NEDSDWHPASRKHYIDDDPSLLSYRESRQFLPKHSSFPAKERETQRRRMHHNPHFKDRNC 227
            + D DW+     H   DD    SYRESRQF PKHSSFP KER T R+RM       +RNC
Sbjct: 624  DRDRDWYHLGCGHS-SDDLCPCSYRESRQFPPKHSSFPDKERYTPRKRMDEKSLI-ERNC 681

Query: 228  NNDPRSDECEFEFLNRSYRMPSSFAEREMESLNNKHEEQFPQIDRELKRYAGRGRHHNRL 407
             +D   DECEFEFLN+SYRM S+ AERE E L+N  EEQFP I R+ +R   RGR  ++ 
Sbjct: 682  IDD--FDECEFEFLNKSYRM-STVAEREQEFLDNNREEQFPHIYRDWRRSVRRGRRFDKP 738

Query: 408  PLVLDTLWSG--KPEDEC 455
            PLVL+ L SG  + ED C
Sbjct: 739  PLVLNNLCSGTMEVEDNC 756


>ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258583 [Vitis vinifera]
            gi|296083247|emb|CBI22883.3| unnamed protein product
            [Vitis vinifera]
          Length = 1300

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
 Frame = +3

Query: 6    KKECFFEQRTLMEYNE--DSDWHPASRKHYIDDDPSLLSYRESRQFLPKHSSFPAKERET 179
            + +  FE+R     N+  + DW+   R   I+D  +L ++RESR+ + K+S +  KER+T
Sbjct: 781  RNKYIFEKRITRAGNKMMERDWYHRERNVSIEDIDTL-THRESRRLVLKYS-YSDKERDT 838

Query: 180  QRRRMHHNPHFKDRNCNND-----PRSDECEFEFLNRSYRMPSSFAEREMESLNNKHEEQ 344
            +RR+ +    F++   N+D       +D+   E + RS      F  +E  SL  K+   
Sbjct: 839  RRRKKNDKLQFQEGPDNDDDLFQCKNTDDVAQEKITRSV----PFMCKERNSLAEKYGRH 894

Query: 345  FPQIDRELKRYAGRGRHHNRLPLVLDTLWSGKPEDE 452
             P   R++  Y GR + +    L LD+ WS   EDE
Sbjct: 895  VPSTGRKVNLY-GRRKRYEDGHLDLDSSWSIGVEDE 929


>emb|CAN76673.1| hypothetical protein VITISV_011790 [Vitis vinifera]
          Length = 1338

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
 Frame = +3

Query: 6    KKECFFEQRTLMEYNE--DSDWHPASRKHYIDDDPSLLSYRESRQFLPKHSSFPAKERET 179
            + +  FE+R     N+  + DW+   R   I+D  +L ++RESR+ + K+S +  KER+T
Sbjct: 781  RNKYIFEKRITRAGNKMMERDWYHRERNVSIEDIDTL-THRESRRLVLKYS-YSDKERDT 838

Query: 180  QRRRMHHNPHFKDRNCNND-----PRSDECEFEFLNRSYRMPSSFAEREMESLNNKHEEQ 344
            +RR+ +    F++   N+D       +D+   E + RS      F  +E  SL  K+   
Sbjct: 839  RRRKKNDKLQFQEGPDNDDDLFQCKNTDDVAQEKITRSV----PFMCKERNSLAEKYGRH 894

Query: 345  FPQIDRELKRYAGRGRHHNRLPLVLDTLWSGKPEDE 452
             P   R++  Y GR + +    L LD+ WS   EDE
Sbjct: 895  VPSTGRKVNLY-GRRKRYEDGHLDLDSSWSIGVEDE 929


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