BLASTX nr result

ID: Glycyrrhiza23_contig00034321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034321
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550470.1| PREDICTED: calcium-activated outward-rectify...   102   9e-23
gb|AFK44211.1| unknown [Medicago truncatula]                          102   3e-20
ref|XP_003610592.1| Outward rectifying potassium channel [Medica...   102   3e-20
ref|XP_003635044.1| PREDICTED: calcium-activated outward-rectify...    91   1e-16
ref|XP_003635043.1| PREDICTED: calcium-activated outward-rectify...    91   1e-16

>ref|XP_003550470.1| PREDICTED: calcium-activated outward-rectifying potassium channel
           1-like [Glycine max]
          Length = 352

 Score =  102 bits (255), Expect(2) = 9e-23
 Identities = 48/62 (77%), Positives = 53/62 (85%)
 Frame = +3

Query: 87  DFNLKQVFLLFAAYLGGGTLCFFLTKYQIKGIKTNGFLDSLYFCVVTMTTVGYGDLVPIS 266
           +F+ K V L  AAYLGGGTLCF LT +QIKGIKTNGFLD++YFCVVTMTTVGYGDLVP S
Sbjct: 65  EFHFKTVLLWLAAYLGGGTLCFLLTSHQIKGIKTNGFLDAIYFCVVTMTTVGYGDLVPDS 124

Query: 267 SL 272
            L
Sbjct: 125 QL 126



 Score = 28.9 bits (63), Expect(2) = 9e-23
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 2   RASEIEINHQEQNDVQNPLHPQSCSCKTRFQF 97
           ++S+ E N +E+N VQNPLH Q    K   +F
Sbjct: 35  KSSDKENNLKEKNVVQNPLHSQYIDPKQEAEF 66


>gb|AFK44211.1| unknown [Medicago truncatula]
          Length = 353

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = +3

Query: 87  DFNLKQVFLLFAAYLGGGTLCFFLTKYQIKGIKTNGFLDSLYFCVVTMTTVGYGDLVPIS 266
           +F  + VFL  AAYLG GTLCF+LT YQI+GIKTNGFLD+LYFCVVTMTTVGYGDLVP S
Sbjct: 68  EFKFRLVFLCLAAYLGTGTLCFYLTSYQIEGIKTNGFLDALYFCVVTMTTVGYGDLVPNS 127

Query: 267 SL 272
           ++
Sbjct: 128 TI 129


>ref|XP_003610592.1| Outward rectifying potassium channel [Medicago truncatula]
           gi|355511647|gb|AES92789.1| Outward rectifying potassium
           channel [Medicago truncatula]
          Length = 370

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = +3

Query: 87  DFNLKQVFLLFAAYLGGGTLCFFLTKYQIKGIKTNGFLDSLYFCVVTMTTVGYGDLVPIS 266
           +F  + VFL  AAYLG GTLCF+LT YQI+GIKTNGFLD+LYFCVVTMTTVGYGDLVP S
Sbjct: 68  EFKFRLVFLCLAAYLGTGTLCFYLTSYQIEGIKTNGFLDALYFCVVTMTTVGYGDLVPNS 127

Query: 267 SL 272
           ++
Sbjct: 128 TI 129


>ref|XP_003635044.1| PREDICTED: calcium-activated outward-rectifying potassium channel
           1-like [Vitis vinifera] gi|297736715|emb|CBI25751.3|
           unnamed protein product [Vitis vinifera]
          Length = 347

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/63 (71%), Positives = 50/63 (79%)
 Frame = +3

Query: 72  VAARPDFNLKQVFLLFAAYLGGGTLCFFLTKYQIKGIKTNGFLDSLYFCVVTMTTVGYGD 251
           V   P F  KQVF+L AAYL  GTLCF+L + QIKG KTNG LD++YFCVVTMTTVGYGD
Sbjct: 61  VKLEPSF--KQVFILLAAYLAVGTLCFYLIRDQIKGRKTNGVLDAVYFCVVTMTTVGYGD 118

Query: 252 LVP 260
           LVP
Sbjct: 119 LVP 121


>ref|XP_003635043.1| PREDICTED: calcium-activated outward-rectifying potassium channel
           1-like [Vitis vinifera] gi|297736711|emb|CBI25747.3|
           unnamed protein product [Vitis vinifera]
          Length = 347

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/63 (71%), Positives = 50/63 (79%)
 Frame = +3

Query: 72  VAARPDFNLKQVFLLFAAYLGGGTLCFFLTKYQIKGIKTNGFLDSLYFCVVTMTTVGYGD 251
           V   P F  KQVF+L AAYL  GTLCF+L + QIKG KTNG LD++YFCVVTMTTVGYGD
Sbjct: 61  VKLEPSF--KQVFILLAAYLAVGTLCFYLIRDQIKGRKTNGVLDAVYFCVVTMTTVGYGD 118

Query: 252 LVP 260
           LVP
Sbjct: 119 LVP 121


Top