BLASTX nr result

ID: Glycyrrhiza23_contig00034314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034314
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590567.1| Pentatricopeptide repeat-containing protein ...   183   1e-44
ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containi...   174   7e-42
ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containi...   169   2e-40
ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|2...   157   8e-37
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]   153   1e-35

>ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479615|gb|AES60818.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/110 (79%), Positives = 92/110 (83%)
 Frame = +3

Query: 3   ENVFPDHINFLALLYACSHSGLIVEGKRLFESMKHEYQLEPWPEHYACLVDLLARSNSLE 182
           ENV PDHI FLALLYACSHSGL+VEGK+ FE MK+EY+LEPWPEHYACLVDLLARSNSLE
Sbjct: 648 ENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLE 707

Query: 183 EAHHFVRNMPIEPSAEVWCALLGACRIHSNXXXXXXXXXXXXXXNTENSG 332
           EA+HFVRNMPIEPSAEVWCALLGACRIHSN              NTENSG
Sbjct: 708 EAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSG 757


>ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/110 (72%), Positives = 90/110 (81%)
 Frame = +3

Query: 3   ENVFPDHINFLALLYACSHSGLIVEGKRLFESMKHEYQLEPWPEHYACLVDLLARSNSLE 182
           +NV PDHI FLALLYACSHSGL+VEGKR FE MK+ YQLEPWPEHYAC+VDLL+RSNSLE
Sbjct: 645 QNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLE 704

Query: 183 EAHHFVRNMPIEPSAEVWCALLGACRIHSNXXXXXXXXXXXXXXNTENSG 332
           EA+HFVRNMPI+PS+E+WCALLGAC IHSN              +TENSG
Sbjct: 705 EAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSG 754


>ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/110 (71%), Positives = 89/110 (80%)
 Frame = +3

Query: 3   ENVFPDHINFLALLYACSHSGLIVEGKRLFESMKHEYQLEPWPEHYACLVDLLARSNSLE 182
           ENV PDHI FLALLYACSHSGL+VEGKR FE MK+ YQLEPWPEHYAC+VDLL+RSNSLE
Sbjct: 645 ENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLE 704

Query: 183 EAHHFVRNMPIEPSAEVWCALLGACRIHSNXXXXXXXXXXXXXXNTENSG 332
           EA+ FVR+MPI+PS+EVWCALLGAC IHSN              +T+NSG
Sbjct: 705 EAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSG 754


>ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|222856250|gb|EEE93797.1|
           predicted protein [Populus trichocarpa]
          Length = 787

 Score =  157 bits (397), Expect = 8e-37
 Identities = 71/90 (78%), Positives = 80/90 (88%)
 Frame = +3

Query: 3   ENVFPDHINFLALLYACSHSGLIVEGKRLFESMKHEYQLEPWPEHYACLVDLLARSNSLE 182
           + + PDHI FLALLYACSHSGLI EGKRL E+MK +YQLEPWPEHYACLVDLL R+N LE
Sbjct: 509 QKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLE 568

Query: 183 EAHHFVRNMPIEPSAEVWCALLGACRIHSN 272
           EA+HFV++M IEP+AEVWCA LGACRIHSN
Sbjct: 569 EAYHFVKSMQIEPTAEVWCAFLGACRIHSN 598


>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/110 (63%), Positives = 84/110 (76%)
 Frame = +3

Query: 3    ENVFPDHINFLALLYACSHSGLIVEGKRLFESMKHEYQLEPWPEHYACLVDLLARSNSLE 182
            E++ PDHI F+A+LYACSHSGL+ EG+R  ESMK+EYQLEPWPEHYACLVDLL R+N LE
Sbjct: 679  ESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLE 738

Query: 183  EAHHFVRNMPIEPSAEVWCALLGACRIHSNXXXXXXXXXXXXXXNTENSG 332
            EA+ FV+ M +EP+AEVWCALLGAC+IHSN              + EN G
Sbjct: 739  EAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPG 788


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