BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034311
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546918.1| PREDICTED: dicer-like protein 4-like [Glycin...   191   5e-47
ref|XP_002527323.1| double-stranded RNA binding protein, putativ...   112   4e-23
ref|XP_002889280.1| hypothetical protein ARALYDRAFT_316895 [Arab...    95   6e-18
ref|NP_178180.1| RNAse THREE-like protein 1 [Arabidopsis thalian...    92   4e-17
ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis...    89   6e-16

>ref|XP_003546918.1| PREDICTED: dicer-like protein 4-like [Glycine max]
          Length = 194

 Score =  191 bits (486), Expect = 5e-47
 Identities = 105/172 (61%), Positives = 115/172 (66%), Gaps = 16/172 (9%)
 Frame = +3

Query: 75  MENKCSHPPKIAVNLNQLPPIDPLRIVNSSFNGKLNNSSTRVSAKVEKPRYNQRTKLVGS 254
           MEN  SH P  AVNLN LPPI+P RI NS   G++NNS +R +AK  K   NQR K V S
Sbjct: 1   MENNFSHAPNFAVNLNHLPPINPFRITNSK--GQMNNSCSRAAAKAVKRNPNQRMKFVAS 58

Query: 255 DE-----------GVVVGDASSISSN-----CGNRTSTTQTLTDEHGMKKGYGRKNLYEI 386
           D+            +VV D SS SSN     CGN TS TQT   E GMKKG  R  LYEI
Sbjct: 59  DKDIVKNPSLGMGNIVVEDTSSTSSNQKIQSCGNTTSPTQT---EEGMKKGTARSTLYEI 115

Query: 387 CAANHWKPPVFECCKEEGPCHKRMFTFKVIVEIDEASENIIECYGAPHQRKK 542
           CA N WKPP+FECCKEEGP HKRMFTFKVI+EI EAS NIIECYGAPH +KK
Sbjct: 116 CAVNCWKPPIFECCKEEGPGHKRMFTFKVIIEI-EASRNIIECYGAPHGKKK 166


>ref|XP_002527323.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223533323|gb|EEF35075.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 219

 Score =  112 bits (280), Expect = 4e-23
 Identities = 71/189 (37%), Positives = 96/189 (50%), Gaps = 33/189 (17%)
 Frame = +3

Query: 75  MENKCSHP----PKIAVNLNQLPPIDPLRIVNSSFNGKLNNSSTRVSAKVEKPR------ 224
           ME KC  P     +  +NL  LPPI+P       +  K N + TR   KV KPR      
Sbjct: 1   MEKKCLEPYPQQKQSHINLKNLPPINPPTTSIPYYQVKRNKTITRYVPKVAKPRPEEEGG 60

Query: 225 -------YNQRTKLVGSDEGVVVGDASSI-------SSNCGNRT--------STTQTLTD 338
                  +   TK     E   + D SS+       S+N   +T        S  + L D
Sbjct: 61  VKAVKFDHEANTKADILAEQEEIDDLSSVCAIKHIDSNNFVKKTHSKLNYEGSDNRVLVD 120

Query: 339 EHG-MKKGYGRKNLYEICAANHWKPPVFECCKEEGPCHKRMFTFKVIVEIDEASENIIEC 515
           +   +K+   +  L+EIC AN+WKPP++ECCKEEGPCH+R+FTFKVIVE+  A   ++EC
Sbjct: 121 KSSELKRVSAKSQLHEICVANNWKPPLYECCKEEGPCHQRLFTFKVIVEMIGAEYIVLEC 180

Query: 516 YGAPHQRKK 542
           YG P  +KK
Sbjct: 181 YGIPKIKKK 189


>ref|XP_002889280.1| hypothetical protein ARALYDRAFT_316895 [Arabidopsis lyrata subsp.
           lyrata] gi|297335121|gb|EFH65539.1| hypothetical protein
           ARALYDRAFT_316895 [Arabidopsis lyrata subsp. lyrata]
          Length = 190

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
 Frame = +3

Query: 105 IAVNLNQLPPIDPLRIVNSSFNGKLNNSSTRVSAKVEKPRYNQRTKLVGSDEGVVVGDAS 284
           I + L  +PP+DP  I +    G+ NN+              +    + S   + +   S
Sbjct: 16  IIITLKDIPPLDPSSIPSLKPMGQDNNND------------EEEDNAISSVSNIQIDPNS 63

Query: 285 SISSNCGNRT-------STTQTLTDEHGMKKGYGRKNLYEICAANHWKPPVFECCKEEGP 443
           + S    N+        +TT+  +     K+G  +  L+EICA+  W+PPV+ECCK +GP
Sbjct: 64  TRSITQENKLVPKPEEDTTTKPNSKGDESKRGSAKSVLHEICASKRWRPPVYECCKVDGP 123

Query: 444 CHKRMFTFKVIVEIDEAS-ENIIECYGAPHQRKK 542
           CH R+FT+KV+VEI E+S + ++EC+G P + KK
Sbjct: 124 CHLRLFTYKVVVEIIESSGKTVLECFGDPRRNKK 157


>ref|NP_178180.1| RNAse THREE-like protein 1 [Arabidopsis thaliana]
           gi|75264856|sp|Q9M8N2.1|RTL1_ARATH RecName:
           Full=Ribonuclease 3-like protein 1; AltName:
           Full=Ribonuclease III-like protein 1; Short=RNase
           III-like protein 1; AltName: Full=Ribonuclease
           three-like protein 1
           gi|6730736|gb|AAF27126.1|AC018849_14 hypothetical
           protein; 4021-3030 [Arabidopsis thaliana]
           gi|26449780|dbj|BAC42013.1| unknown protein [Arabidopsis
           thaliana] gi|28950719|gb|AAO63283.1| At1g80650
           [Arabidopsis thaliana] gi|332198311|gb|AEE36432.1| RNAse
           THREE-like protein 1 [Arabidopsis thaliana]
          Length = 198

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 49/160 (30%), Positives = 87/160 (54%), Gaps = 14/160 (8%)
 Frame = +3

Query: 105 IAVNLNQLPPIDPLRI--VNSSFNGKLNNSSTRVSAKVEKPRYNQRTKLVGSDEGVVVGD 278
           I ++L  +PP+DP  I  +        N    R   K +  ++ +    + S   + +  
Sbjct: 17  IIISLKDIPPLDPSSIPSMKPMAQDHHNVGMQRFQEKTDF-KFEEEDNAISSFSNIQIDP 75

Query: 279 ASSISSNCGNR---------TSTTQTLT--DEHGMKKGYGRKNLYEICAANHWKPPVFEC 425
            S+ S +   +         T+TT+ ++  DE   ++G  +  L+E+CA+  W+PPV+EC
Sbjct: 76  NSTRSISLEKKLAPKPDEEHTTTTKPISKDDESKTRRGSAKSVLHEMCASKRWRPPVYEC 135

Query: 426 CKEEGPCHKRMFTFKVIVEI-DEASENIIECYGAPHQRKK 542
           C  +GPCH R+FT+KV+VEI D + + ++EC+G P ++KK
Sbjct: 136 CNVDGPCHLRLFTYKVMVEIRDSSGKTVLECFGDPRRKKK 175


>ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
            gi|223537239|gb|EEF38871.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1633

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 39/80 (48%), Positives = 53/80 (66%)
 Frame = +3

Query: 303  GNRTSTTQTLTDEHGMKKGYGRKNLYEICAANHWKPPVFECCKEEGPCHKRMFTFKVIVE 482
            G + S T         K    +  L++ICAAN WKPP+FECC EEGP H + F++KVIVE
Sbjct: 1531 GGQPSATVAYPTSDMDKPTSAKSRLHDICAANCWKPPLFECCYEEGPSHLKSFSYKVIVE 1590

Query: 483  IDEASENIIECYGAPHQRKK 542
            I+ A + I+EC+GAP ++KK
Sbjct: 1591 IEAAPDMILECFGAPREKKK 1610