BLASTX nr result

ID: Glycyrrhiza23_contig00034296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034296
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525855.1| PREDICTED: auxin-induced protein 5NG4-like [...    90   2e-16
gb|AFK40368.1| unknown [Lotus japonicus]                               86   3e-15
ref|XP_003549917.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induce...    85   5e-15
ref|XP_003517418.1| PREDICTED: auxin-induced protein 5NG4-like [...    82   3e-14
ref|XP_004147210.1| PREDICTED: auxin-induced protein 5NG4-like [...    79   3e-13

>ref|XP_003525855.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 368

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/58 (82%), Positives = 50/58 (86%), Gaps = 5/58 (8%)
 Frame = -2

Query: 302 VIFSVITLGDTINIGSLAGMFLMFTGLYFVLWAKGKE-----GGLESEFVDAEKPLLS 144
           VIFSV+TLG TINIGS AGMFLMFTGLYFVLWAKGKE     GGLESE+ DAEKPLLS
Sbjct: 312 VIFSVVTLGQTINIGSFAGMFLMFTGLYFVLWAKGKEGFAKGGGLESEY-DAEKPLLS 368


>gb|AFK40368.1| unknown [Lotus japonicus]
          Length = 352

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/53 (81%), Positives = 46/53 (86%)
 Frame = -2

Query: 302 VIFSVITLGDTINIGSLAGMFLMFTGLYFVLWAKGKEGGLESEFVDAEKPLLS 144
           V+FS  T+GDTINIGS AGM LMFTGLYFVLWAKGKEG  +SEF DAEKPLLS
Sbjct: 301 VVFSAFTIGDTINIGSFAGMVLMFTGLYFVLWAKGKEGYSDSEF-DAEKPLLS 352


>ref|XP_003549917.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein 5NG4-like
           [Glycine max]
          Length = 355

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/58 (77%), Positives = 48/58 (82%), Gaps = 5/58 (8%)
 Frame = -2

Query: 302 VIFSVITLGDTINIGSLAGMFLMFTGLYFVLWAKGKE-----GGLESEFVDAEKPLLS 144
           V+FSV+TLG TINIGS AGMFLMFTG YFVLWAKG E     GGLESE+ DAEKPLLS
Sbjct: 299 VLFSVVTLGQTINIGSFAGMFLMFTGFYFVLWAKGTEGYAKGGGLESEY-DAEKPLLS 355


>ref|XP_003517418.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 345

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/58 (79%), Positives = 47/58 (81%), Gaps = 5/58 (8%)
 Frame = -2

Query: 302 VIFSVITLGDTINIGSLAGMFLMFTGLYFVLWAKGKEG-----GLESEFVDAEKPLLS 144
           VIFSV+TL DTINIGSL GMFLMFTGLY VLWAKGKEG     GLESE  DAE PLLS
Sbjct: 289 VIFSVVTLEDTINIGSLEGMFLMFTGLYLVLWAKGKEGHPDGDGLESE-CDAETPLLS 345


>ref|XP_004147210.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]
           gi|449504972|ref|XP_004162344.1| PREDICTED:
           auxin-induced protein 5NG4-like [Cucumis sativus]
          Length = 351

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/58 (72%), Positives = 48/58 (82%), Gaps = 5/58 (8%)
 Frame = -2

Query: 302 VIFSVITLGDTINIGSLAGMFLMFTGLYFVLWAKGKE-----GGLESEFVDAEKPLLS 144
           ++ SVITLG++INIGSLAGMF+MFTGLYFVLWAKGKE       LESEF D +KPLLS
Sbjct: 295 LVLSVITLGESINIGSLAGMFMMFTGLYFVLWAKGKERYVNRNHLESEF-DVDKPLLS 351


Top