BLASTX nr result

ID: Glycyrrhiza23_contig00034274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034274
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
gb|ADE77782.1| unknown [Picea sitchensis]                              75   5e-12
gb|ADE77505.1| unknown [Picea sitchensis]                              75   5e-12
gb|ADE76509.1| unknown [Picea sitchensis]                              74   1e-11
gb|AFG55306.1| Pinus taeda anonymous locus 0_14503_01 genomic se...    73   3e-11

>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = +3

Query: 3   YVLLSNLYASGKRWEDMSKVRSLIKDKGLEKKPGSSWIQIGHCIYVFYAMSTFHPEFVEI 182
           YVLLSNLYASGKRWEDMSKVRS+IKDKGLEKKPGSSWIQ+GHCIYVF+A S FHP F +I
Sbjct: 641 YVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKI 700

Query: 183 EETLDSWIQI 212
           EETL+S + +
Sbjct: 701 EETLNSLLLV 710


>gb|ADE77782.1| unknown [Picea sitchensis]
          Length = 210

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 33/66 (50%), Positives = 48/66 (72%)
 Frame = +3

Query: 3   YVLLSNLYASGKRWEDMSKVRSLIKDKGLEKKPGSSWIQIGHCIYVFYAMSTFHPEFVEI 182
           YVLLSN+YA+  +W+D +KVR L+KD+G+ K+PG SWI++   ++ F A  T HP+  EI
Sbjct: 44  YVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEI 103

Query: 183 EETLDS 200
            E L+S
Sbjct: 104 HEFLES 109


>gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 33/66 (50%), Positives = 48/66 (72%)
 Frame = +3

Query: 3   YVLLSNLYASGKRWEDMSKVRSLIKDKGLEKKPGSSWIQIGHCIYVFYAMSTFHPEFVEI 182
           YVLLSN+YA+  +W+D +KVR L+KD+G+ K+PG SWI++   ++ F A  T HP+  EI
Sbjct: 348 YVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEI 407

Query: 183 EETLDS 200
            E L+S
Sbjct: 408 HEFLES 413


>gb|ADE76509.1| unknown [Picea sitchensis]
          Length = 246

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 30/65 (46%), Positives = 48/65 (73%)
 Frame = +3

Query: 3   YVLLSNLYASGKRWEDMSKVRSLIKDKGLEKKPGSSWIQIGHCIYVFYAMSTFHPEFVEI 182
           YVLLSN+YA+  RW+D++KVR ++KD+G++K+PG SWI++ + ++ F      HP+  EI
Sbjct: 80  YVLLSNIYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEI 139

Query: 183 EETLD 197
             TL+
Sbjct: 140 YSTLE 144


>gb|AFG55306.1| Pinus taeda anonymous locus 0_14503_01 genomic sequence
          Length = 160

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 30/66 (45%), Positives = 48/66 (72%)
 Frame = +3

Query: 3   YVLLSNLYASGKRWEDMSKVRSLIKDKGLEKKPGSSWIQIGHCIYVFYAMSTFHPEFVEI 182
           YVLLSN+YA+  +W+++ K+R ++KDKGL++ PG SWI+  + ++ F A    HP+  +I
Sbjct: 84  YVLLSNIYAAAGKWDNVGKIRKIMKDKGLKRSPGCSWIEHKNRVHTFIAGDRSHPQIEKI 143

Query: 183 EETLDS 200
            ETL+S
Sbjct: 144 SETLES 149


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