BLASTX nr result

ID: Glycyrrhiza23_contig00034260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034260
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago ...   209   2e-52
ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25...   208   4e-52
ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_004146198.1| PREDICTED: F-box/kelch-repeat protein SKIP25...   176   1e-42
ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42

>ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago truncatula]
           gi|355513911|gb|AES95534.1| F-box/kelch-repeat protein
           SKIP25 [Medicago truncatula]
          Length = 380

 Score =  209 bits (531), Expect = 2e-52
 Identities = 99/119 (83%), Positives = 109/119 (91%)
 Frame = -2

Query: 357 GPALATPRRWCALGASRGVVYVASGIGSHFSVDVARSMEKWNPMKTNEWWEKKTELKDGR 178
           GPAL  PRRWCALG S G+VYVASGIGSHFSVDVA+S+EKW+P+  +  WEKKT++KDGR
Sbjct: 175 GPALTNPRRWCALGTSEGMVYVASGIGSHFSVDVAKSIEKWDPIN-DPIWEKKTDMKDGR 233

Query: 177 FSREAIDAVGWRGKLCMVNVKGDAAKEGVVYDVAEDTWKEMPEGMLLGWRGPVAAMEEE 1
           FSREA+DAVGWRGKL MVNVKGDAAKEGVVYDV EDTWKEMPEGMLLG+RGPVAAMEEE
Sbjct: 234 FSREAVDAVGWRGKLYMVNVKGDAAKEGVVYDVEEDTWKEMPEGMLLGFRGPVAAMEEE 292


>ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Glycine max]
          Length = 375

 Score =  208 bits (529), Expect = 4e-52
 Identities = 98/119 (82%), Positives = 104/119 (87%)
 Frame = -2

Query: 357 GPALATPRRWCALGASRGVVYVASGIGSHFSVDVARSMEKWNPMKTNEWWEKKTELKDGR 178
           GP L+TPRRWCALG+    VYVASGIGSHFS+ VARS++KWN    N  WEKKTELKDGR
Sbjct: 168 GPTLSTPRRWCALGSLGPTVYVASGIGSHFSIHVARSLQKWNLQNPNAVWEKKTELKDGR 227

Query: 177 FSREAIDAVGWRGKLCMVNVKGDAAKEGVVYDVAEDTWKEMPEGMLLGWRGPVAAMEEE 1
           FSREAIDAVGW+ KLCMVNVKGDAAKEGVVYDVAED WKEMPEGML GWRGPVAAMEEE
Sbjct: 228 FSREAIDAVGWKQKLCMVNVKGDAAKEGVVYDVAEDAWKEMPEGMLHGWRGPVAAMEEE 286


>ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  184 bits (466), Expect = 8e-45
 Identities = 86/131 (65%), Positives = 103/131 (78%), Gaps = 12/131 (9%)
 Frame = -2

Query: 357 GPALATPRRWCALGASRGVVYVASGIGSHFSVDVARSMEKWNPM-----------KTNEW 211
           GP LATPRRWCA G++ G VYVASGIGS ++ DVA+S+EKW+             KT  W
Sbjct: 176 GPPLATPRRWCAAGSAHGTVYVASGIGSQYNTDVAKSLEKWDLQNQKAMISNIRNKTTTW 235

Query: 210 -WEKKTELKDGRFSREAIDAVGWRGKLCMVNVKGDAAKEGVVYDVAEDTWKEMPEGMLLG 34
            W K  ELK+GRFSR+AIDAVGWRGKLCMVN+KGDAAKEG+VYD  +DTW++MP+GM+ G
Sbjct: 236 KWVKVKELKNGRFSRDAIDAVGWRGKLCMVNMKGDAAKEGIVYDTEKDTWEDMPQGMVAG 295

Query: 33  WRGPVAAMEEE 1
           WRGPVAAM+EE
Sbjct: 296 WRGPVAAMDEE 306


>ref|XP_004146198.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Cucumis sativus]
           gi|449521327|ref|XP_004167681.1| PREDICTED:
           F-box/kelch-repeat protein SKIP25-like [Cucumis sativus]
          Length = 375

 Score =  176 bits (447), Expect = 1e-42
 Identities = 84/120 (70%), Positives = 100/120 (83%), Gaps = 2/120 (1%)
 Frame = -2

Query: 354 PALATPRRWCALGASRGVVYVASGIGSHFSVDVARSMEKWNPMKTN--EWWEKKTELKDG 181
           P L TPRRWCA GA  G VYVASGIGS FS DVARS+E+W+  K+N  + WEK + LKDG
Sbjct: 164 PPLPTPRRWCAAGALHGSVYVASGIGSFFSTDVARSVERWD-FKSNGADGWEKVSGLKDG 222

Query: 180 RFSREAIDAVGWRGKLCMVNVKGDAAKEGVVYDVAEDTWKEMPEGMLLGWRGPVAAMEEE 1
           +FSR+AIDAVGW+GKLCMVNVKG A KEG+VYD+ +D W+EMPEGM+ GWRGPVAAM+E+
Sbjct: 223 KFSRDAIDAVGWKGKLCMVNVKGHALKEGLVYDLEKDEWEEMPEGMIEGWRGPVAAMDEK 282


>ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|222872684|gb|EEF09815.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  174 bits (442), Expect = 5e-42
 Identities = 83/131 (63%), Positives = 98/131 (74%), Gaps = 12/131 (9%)
 Frame = -2

Query: 357 GPALATPRRWCALGASRGVVYVASGIGSHFSVDVARSMEKWNPM-----------KTNEW 211
           GP L TPRRWCA G+++  VYVASGIGS F+ DV++S+EKW+             KT  W
Sbjct: 178 GPPLTTPRRWCAAGSAKDTVYVASGIGSQFNTDVSKSVEKWDLQSKNVGISTIANKTITW 237

Query: 210 -WEKKTELKDGRFSREAIDAVGWRGKLCMVNVKGDAAKEGVVYDVAEDTWKEMPEGMLLG 34
            WEK   LKDGRF R+AIDAVGWRGKLCMVN+KGDA KEG+VYD  +D W+ MPEGML G
Sbjct: 238 KWEKVKGLKDGRFCRDAIDAVGWRGKLCMVNMKGDAPKEGLVYDTEKDAWENMPEGMLAG 297

Query: 33  WRGPVAAMEEE 1
           WRGPVA+M+EE
Sbjct: 298 WRGPVASMDEE 308


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