BLASTX nr result

ID: Glycyrrhiza23_contig00034259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034259
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus c...   194   6e-48
ref|XP_002320371.1| predicted protein [Populus trichocarpa] gi|2...   187   8e-46
ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydr...   185   3e-45
ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate deh...   184   6e-45
emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]   184   6e-45

>ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223540079|gb|EEF41656.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 515

 Score =  194 bits (493), Expect = 6e-48
 Identities = 91/112 (81%), Positives = 99/112 (88%)
 Frame = +3

Query: 6   ILHNPAFRHAGYNGIYVPMLVDDVKEFFSTYTSMDFAGFSVGIPYKEAAIGCCDEVHPLA 185
           ILHNPAFRH GYNGIYVPM VDD+KEFF TYTS DFAGFSVGIP+KEAA+ CCDEVHPLA
Sbjct: 251 ILHNPAFRHTGYNGIYVPMQVDDIKEFFRTYTSTDFAGFSVGIPHKEAAVSCCDEVHPLA 310

Query: 186 KSIGAVNTIIRRPTDGKLIGYNTDCEASITAIEDAMRGRQGVKGEASHTSPI 341
           KSIGAVNTI+RRPTDGKL+GYNTDCEASITAIEDA+R R+     A  TSP+
Sbjct: 311 KSIGAVNTIVRRPTDGKLVGYNTDCEASITAIEDALRERRPTNRGALDTSPL 362


>ref|XP_002320371.1| predicted protein [Populus trichocarpa] gi|222861144|gb|EEE98686.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  187 bits (475), Expect = 8e-46
 Identities = 85/98 (86%), Positives = 93/98 (94%)
 Frame = +3

Query: 6   ILHNPAFRHAGYNGIYVPMLVDDVKEFFSTYTSMDFAGFSVGIPYKEAAIGCCDEVHPLA 185
           +LHNPAFRH GYNGIYVPM VDDVKEFF TYTS DFAGFSVGIP+KEAA+GCCDEVHPLA
Sbjct: 76  VLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPHKEAAVGCCDEVHPLA 135

Query: 186 KSIGAVNTIIRRPTDGKLIGYNTDCEASITAIEDAMRG 299
           KSIGAVNTI+RRPTDGKL+GYNTDC+ASI+AIEDA+ G
Sbjct: 136 KSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDALTG 173


>ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222861143|gb|EEE98685.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 504

 Score =  185 bits (470), Expect = 3e-45
 Identities = 84/96 (87%), Positives = 92/96 (95%)
 Frame = +3

Query: 6   ILHNPAFRHAGYNGIYVPMLVDDVKEFFSTYTSMDFAGFSVGIPYKEAAIGCCDEVHPLA 185
           +LHNPAFRH GYNGIYVPM VDDVKEFF TYTS DFAGFSVGIP+KEAA+GCCDEVHPLA
Sbjct: 251 VLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPHKEAAVGCCDEVHPLA 310

Query: 186 KSIGAVNTIIRRPTDGKLIGYNTDCEASITAIEDAM 293
           KSIGAVNTI+RRPTDGKL+GYNTDC+ASI+AIEDA+
Sbjct: 311 KSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDAL 346


>ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
           dehydrogenase, chloroplastic [Vitis vinifera]
           gi|298204989|emb|CBI34296.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  184 bits (467), Expect = 6e-45
 Identities = 89/112 (79%), Positives = 97/112 (86%)
 Frame = +3

Query: 6   ILHNPAFRHAGYNGIYVPMLVDDVKEFFSTYTSMDFAGFSVGIPYKEAAIGCCDEVHPLA 185
           ILHNPAFRH  YNGIYVPMLVDD+KEFFS Y+S DFAGFSVGIPYKEA  G CDE+HPLA
Sbjct: 255 ILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEAVTGFCDELHPLA 314

Query: 186 KSIGAVNTIIRRPTDGKLIGYNTDCEASITAIEDAMRGRQGVKGEASHTSPI 341
           +SIGAVNTI+RRP+DGKLIGYNTDCEASITAIEDA+R R    GEA   SP+
Sbjct: 315 QSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEAPLNSPL 366


>emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]
          Length = 1071

 Score =  184 bits (467), Expect = 6e-45
 Identities = 89/112 (79%), Positives = 97/112 (86%)
 Frame = +3

Query: 6   ILHNPAFRHAGYNGIYVPMLVDDVKEFFSTYTSMDFAGFSVGIPYKEAAIGCCDEVHPLA 185
           ILHNPAFRH  YNGIYVPMLVDD+KEFFS Y+S DFAGFSVGIPYKEA  G CDE+HPLA
Sbjct: 255 ILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEAVTGFCDELHPLA 314

Query: 186 KSIGAVNTIIRRPTDGKLIGYNTDCEASITAIEDAMRGRQGVKGEASHTSPI 341
           +SIGAVNTI+RRP+DGKLIGYNTDCEASITAIEDA+R R    GEA   SP+
Sbjct: 315 QSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEAPLNSPL 366



 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/102 (50%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
 Frame = +3

Query: 6    ILHNPAFRHAGYNGIYVPMLVDDVKEFFSTYTSMDF-AGFSVGIPYKEAAIGCCDEVHPL 182
            +L N AF+  G N +YV +LVDDV++FF+TY++ DF +G S  IP+KE AI C D + P+
Sbjct: 809  LLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPHKEVAIKCMDTIDPI 868

Query: 183  AKSIGAVNTIIRRPTDGKLIGYNTDCEASITAIEDAMRGRQG 308
            A+ IGA+N I+R+P DGKL  +NTD   +I AIED +R   G
Sbjct: 869  ARKIGAINNIVRKP-DGKLTAFNTDYIGAIEAIEDGLRESNG 909


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