BLASTX nr result

ID: Glycyrrhiza23_contig00034247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034247
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329111.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002316920.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002532684.1| conserved hypothetical protein [Ricinus comm...    78   9e-13
ref|NP_001118635.1| uncharacterized protein [Arabidopsis thalian...    65   4e-09
gb|AAF35418.1| hypothetical protein [Arabidopsis thaliana] gi|15...    65   6e-09

>ref|XP_002329111.1| predicted protein [Populus trichocarpa] gi|222869780|gb|EEF06911.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/73 (52%), Positives = 48/73 (65%)
 Frame = -3

Query: 333 MSHRFRPACTCSNRPGSVRCARHGYVVPGERLKKRVASKEIXXXXXXXXXXXXXXXXLNF 154
           +S R R  CTCSNRPGSVRC++HGY+VP ++L++  A+ EI                 NF
Sbjct: 36  ISPRPRSTCTCSNRPGSVRCSKHGYLVPSDKLRRNQANTEILRRALAPPNRRLTLRWFNF 95

Query: 153 KPTPSRLSNMSMA 115
           +PTPSRLSNMSMA
Sbjct: 96  QPTPSRLSNMSMA 108


>ref|XP_002316920.1| predicted protein [Populus trichocarpa] gi|222859985|gb|EEE97532.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = -3

Query: 324 RFRPACTCSNRPGSVRCARHGYVVPGERL-KKRVASKEIXXXXXXXXXXXXXXXXLNFKP 148
           R R  CTCSNRPGSVRC++HGY+VPG++L ++  A+KE+                 NF+P
Sbjct: 39  RPRSTCTCSNRPGSVRCSKHGYMVPGDKLIRRHQANKELLRRALAPPNRRLTLRWFNFRP 98

Query: 147 TPSRLSNMSMA 115
           TPSRLSNMSMA
Sbjct: 99  TPSRLSNMSMA 109


>ref|XP_002532684.1| conserved hypothetical protein [Ricinus communis]
           gi|223527581|gb|EEF29697.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 117

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
 Frame = -3

Query: 330 SHRFRPACTCSNRPGSVRCARHGYVVPGERLKK-RVASKEIXXXXXXXXXXXXXXXXLNF 154
           S R R  CTCSNRPGSVRC++HGYV+P ++L++   AS+EI                 NF
Sbjct: 45  SPRPRSTCTCSNRPGSVRCSKHGYVLPSDKLRRHHQASREILRRALAPPNRKMSLRWWNF 104

Query: 153 KPTPSRLSNMSMA 115
           +PTPSRLSNMSMA
Sbjct: 105 RPTPSRLSNMSMA 117


>ref|NP_001118635.1| uncharacterized protein [Arabidopsis thaliana]
           gi|26450598|dbj|BAC42411.1| unknown protein [Arabidopsis
           thaliana] gi|332642164|gb|AEE75685.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 106

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
 Frame = -3

Query: 336 GMSHRFRPACTCSNRPGSVRCARHGYVVPG-ERLKKRVA--SKEIXXXXXXXXXXXXXXX 166
           G   R R ACTCS RPGS +CARHG+VVP  ERL ++ +  S+E+               
Sbjct: 30  GSGLRVRVACTCSGRPGSTKCARHGFVVPSDERLMRKASDGSREVLRRALTPPIRRMNLR 89

Query: 165 XLNFKPTPSRLSNMS 121
            LNF+PTPSRL  MS
Sbjct: 90  WLNFRPTPSRLCKMS 104


>gb|AAF35418.1| hypothetical protein [Arabidopsis thaliana]
           gi|15795117|dbj|BAB02381.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 406

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/70 (57%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
 Frame = +2

Query: 113 QAMDMLESLLGVGLKFNHLRPKRRGGGVSALLNISLLATRFFNL---SPGTTYP*RAHRT 283
           Q  D+L+  LGVG KFNH R  RR GGV AL N SLL +  F +   S GTT P RAH  
Sbjct: 298 QTEDILQRRLGVGRKFNHRRFIRRIGGVKALRNTSLLPSLAFRISLSSLGTTNPCRAHFV 357

Query: 284 EPGRLEHVQA 313
           EPGR E VQA
Sbjct: 358 EPGRPEQVQA 367


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