BLASTX nr result

ID: Glycyrrhiza23_contig00034239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034239
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
emb|CBI21243.3| unnamed protein product [Vitis vinifera]              103   1e-20
gb|ADE75673.1| unknown [Picea sitchensis]                             102   3e-20
ref|NP_173004.1| pentatricopeptide repeat-containing protein [Ar...   101   5e-20
gb|ABK26521.1| unknown [Picea sitchensis]                             100   2e-19

>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/80 (85%), Positives = 72/80 (90%)
 Frame = +3

Query: 3   YGIEPDMEHYSCMVDLIGRAGDIDGAYKFITRMPVIPDANVLGSLLGACWLHNKVELAEL 182
           YGIEP+MEHYSCMVDLIGRAGD+DGAYKFITRMP+ PDANV GSLLGAC LHNKVEL EL
Sbjct: 566 YGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTEL 625

Query: 183 LAEHIFQLNAEDPGHYVLLS 242
           LAE I QL A+D GHYVLLS
Sbjct: 626 LAERILQLKADDSGHYVLLS 645


>emb|CBI21243.3| unnamed protein product [Vitis vinifera]
          Length = 778

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/80 (57%), Positives = 60/80 (75%)
 Frame = +3

Query: 3   YGIEPDMEHYSCMVDLIGRAGDIDGAYKFITRMPVIPDANVLGSLLGACWLHNKVELAEL 182
           +G+ P  EHY+CMVDL+GRAG +  A  FI RMP+ PDA V G+LLGAC +H+ +E AE 
Sbjct: 429 FGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGACRIHSNLETAET 488

Query: 183 LAEHIFQLNAEDPGHYVLLS 242
            A H+F L+AE+PG Y+LLS
Sbjct: 489 AARHLFNLDAENPGRYILLS 508


>gb|ADE75673.1| unknown [Picea sitchensis]
          Length = 246

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/79 (56%), Positives = 64/79 (81%)
 Frame = +3

Query: 3   YGIEPDMEHYSCMVDLIGRAGDIDGAYKFITRMPVIPDANVLGSLLGACWLHNKVELAEL 182
           YGIEP ++HY+CMVD++GRAG +D A+ FI+ MP+ PD  V G+LLGAC +H  +ELAE 
Sbjct: 5   YGIEPRVKHYACMVDILGRAGCLDEAHDFISNMPLEPDDGVWGALLGACKIHLNIELAEC 64

Query: 183 LAEHIFQLNAEDPGHYVLL 239
           +AEH+F+L +E+ G+YV+L
Sbjct: 65  VAEHLFKLESENVGYYVVL 83


>ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
           gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein
           [Arabidopsis thaliana] gi|300825685|gb|ADK35876.1|
           chloroplast vanilla cream 1 [Arabidopsis thaliana]
           gi|332191210|gb|AEE29331.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  101 bits (252), Expect = 5e-20
 Identities = 42/79 (53%), Positives = 64/79 (81%)
 Frame = +3

Query: 3   YGIEPDMEHYSCMVDLIGRAGDIDGAYKFITRMPVIPDANVLGSLLGACWLHNKVELAEL 182
           YG+ P+++HY+C+VDL+GRAG++  A+KFI +MPV PD  V G+LL AC +H+K++L EL
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGEL 686

Query: 183 LAEHIFQLNAEDPGHYVLL 239
            A+HIF+L+ +  G+Y+LL
Sbjct: 687 SAQHIFELDKKSVGYYILL 705


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/80 (60%), Positives = 58/80 (72%)
 Frame = +3

Query: 3   YGIEPDMEHYSCMVDLIGRAGDIDGAYKFITRMPVIPDANVLGSLLGACWLHNKVELAEL 182
           +GI P  EHYSCMVDL GRAG +D A  FI +MPV P+A+V GSLLGAC +H  +ELAE 
Sbjct: 129 HGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAER 188

Query: 183 LAEHIFQLNAEDPGHYVLLS 242
             E + +L  E+PG YVLLS
Sbjct: 189 AVEQLIELTPENPGTYVLLS 208


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