BLASTX nr result

ID: Glycyrrhiza23_contig00034238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034238
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523864.1| PREDICTED: vacuolar protein sorting-associat...   149   3e-34
ref|XP_003598265.1| Rab5 GDP/GTP exchange factor [Medicago trunc...   146   2e-33
ref|XP_002265083.1| PREDICTED: vacuolar protein sorting-associat...   135   3e-30
ref|XP_003559162.1| PREDICTED: vacuolar protein sorting-associat...   125   3e-27
ref|XP_002329217.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26

>ref|XP_003523864.1| PREDICTED: vacuolar protein sorting-associated protein 9A-like
           [Glycine max]
          Length = 375

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/80 (91%), Positives = 77/80 (96%)
 Frame = +2

Query: 2   LSIMNCCRVINNLLLNAAMSEHVPAGADDFLPVLIYVTIKANPPMLHSNLKFIKLFRRQA 181
           LSIMNCCR+INNLLLNAAMSE+VPAGAD FLPVLIYVTIKANPP LHSNLKFIKL+ RQA
Sbjct: 156 LSIMNCCRIINNLLLNAAMSEYVPAGADGFLPVLIYVTIKANPPKLHSNLKFIKLYTRQA 215

Query: 182 KLISEAEYYFTNLMSAKTFI 241
           KLISEAEYYFTNL+SAKTFI
Sbjct: 216 KLISEAEYYFTNLVSAKTFI 235


>ref|XP_003598265.1| Rab5 GDP/GTP exchange factor [Medicago truncatula]
           gi|355487313|gb|AES68516.1| Rab5 GDP/GTP exchange factor
           [Medicago truncatula]
          Length = 394

 Score =  146 bits (368), Expect = 2e-33
 Identities = 73/82 (89%), Positives = 78/82 (95%), Gaps = 3/82 (3%)
 Frame = +2

Query: 5   SIMNCCRVINNLLLNAAMSEHVPAGADDFLPVLIYVTIK---ANPPMLHSNLKFIKLFRR 175
           +IMNCCRVINNLLLNAAMSE+VPAGADDF+PVLIYVTIK   ANPPMLHSNLKFIKL+RR
Sbjct: 161 TIMNCCRVINNLLLNAAMSEYVPAGADDFIPVLIYVTIKARLANPPMLHSNLKFIKLYRR 220

Query: 176 QAKLISEAEYYFTNLMSAKTFI 241
           Q KLISEAEYYFTNL+SAKTFI
Sbjct: 221 QTKLISEAEYYFTNLVSAKTFI 242


>ref|XP_002265083.1| PREDICTED: vacuolar protein sorting-associated protein 9A-like
           [Vitis vinifera]
          Length = 382

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/81 (82%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   LSIMNCCRVINNLLLNAAMSE-HVPAGADDFLPVLIYVTIKANPPMLHSNLKFIKLFRRQ 178
           L I+NCCRVINNLLLNAAMSE H+ AGADDFLPVLIYVTIKANPP LHSNLKFI+L+RRQ
Sbjct: 158 LCILNCCRVINNLLLNAAMSENHILAGADDFLPVLIYVTIKANPPQLHSNLKFIQLYRRQ 217

Query: 179 AKLISEAEYYFTNLMSAKTFI 241
            KL+SE  YYFTNL+SAK+FI
Sbjct: 218 EKLVSEVAYYFTNLVSAKSFI 238


>ref|XP_003559162.1| PREDICTED: vacuolar protein sorting-associated protein 9A-like
           [Brachypodium distachyon]
          Length = 351

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/81 (72%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   LSIMNCCRVINNLLLNAAMS-EHVPAGADDFLPVLIYVTIKANPPMLHSNLKFIKLFRRQ 178
           L IM+CC+VINNLLLN +MS +  P+GAD+FLP+LIY+TIKANPP LHSNLKF++LFRR+
Sbjct: 161 LCIMSCCQVINNLLLNVSMSNDRSPSGADEFLPILIYITIKANPPQLHSNLKFVQLFRRE 220

Query: 179 AKLISEAEYYFTNLMSAKTFI 241
           AKL+SE EYY TNL+SAK FI
Sbjct: 221 AKLVSEVEYYLTNLISAKMFI 241


>ref|XP_002329217.1| predicted protein [Populus trichocarpa] gi|222870998|gb|EEF08129.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  124 bits (310), Expect = 1e-26
 Identities = 63/91 (69%), Positives = 73/91 (80%), Gaps = 13/91 (14%)
 Frame = +2

Query: 8   IMNCCRVINNLLLNAAMSE-HVPAGADDFLPVLIYVTIKA------------NPPMLHSN 148
           IM+CCR+INNLLLNA+MSE HVP GADDFLPVLIYVTIKA            NPP LHSN
Sbjct: 149 IMSCCRIINNLLLNASMSENHVPGGADDFLPVLIYVTIKARSPWTNWFFQQANPPQLHSN 208

Query: 149 LKFIKLFRRQAKLISEAEYYFTNLMSAKTFI 241
           LK+I+L+RRQ K++SE  YYFTNL+SAK+FI
Sbjct: 209 LKYIQLYRRQEKMVSEPAYYFTNLVSAKSFI 239


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