BLASTX nr result

ID: Glycyrrhiza23_contig00034230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034230
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44211.1| unknown [Medicago truncatula]                          174   7e-42
ref|XP_003610592.1| Outward rectifying potassium channel [Medica...   166   2e-39
ref|XP_004159125.1| PREDICTED: two-pore potassium channel 1-like...   162   3e-38
ref|XP_004139602.1| PREDICTED: two-pore potassium channel 1-like...   162   3e-38
ref|XP_002323126.1| outward rectifying potassium channel [Populu...   160   1e-37

>gb|AFK44211.1| unknown [Medicago truncatula]
          Length = 353

 Score =  174 bits (441), Expect = 7e-42
 Identities = 89/107 (83%), Positives = 95/107 (88%)
 Frame = -1

Query: 322 STVTTLGYGDKSFSTAEGRVFAVFWILSGTICLAQFFLYLAELYTEGRQRSLAKMVLSRR 143
           STVTTLGYGDKSFSTA GR+FAV WILS TICLAQ F YLAELYTE RQRSLAKMVL+R+
Sbjct: 227 STVTTLGYGDKSFSTAAGRIFAVVWILSSTICLAQSFAYLAELYTEDRQRSLAKMVLTRK 286

Query: 142 LSLSEFETADLDQDKVVSAAEFIVYKLKEMGKISQEDISVVMESLRK 2
           LSLS+ E ADLD DK VSAAEF+VYKLKEMGKI+QEDIS VMES RK
Sbjct: 287 LSLSDLEAADLDGDKAVSAAEFVVYKLKEMGKINQEDISAVMESFRK 333


>ref|XP_003610592.1| Outward rectifying potassium channel [Medicago truncatula]
           gi|355511647|gb|AES92789.1| Outward rectifying potassium
           channel [Medicago truncatula]
          Length = 370

 Score =  166 bits (420), Expect = 2e-39
 Identities = 90/124 (72%), Positives = 96/124 (77%), Gaps = 17/124 (13%)
 Frame = -1

Query: 322 STVTTLGYGDKSFSTAEGRVFAVFWILSGTICLAQFFLYLAELYTEGRQRSLAKMVLSRR 143
           STVTTLGYGDKSFSTA GR+FAVFWILS TICLAQ F YLAELYTE RQRSLAKMVL+R+
Sbjct: 227 STVTTLGYGDKSFSTAAGRIFAVFWILSSTICLAQSFAYLAELYTEDRQRSLAKMVLTRK 286

Query: 142 LSLSEFETADLDQDKVV-----------------SAAEFIVYKLKEMGKISQEDISVVME 14
           LSLS+ E ADLD DK V                 SAAEF+VYKLKEMGKI+QEDIS VME
Sbjct: 287 LSLSDLEAADLDGDKAVSYTKQLNPRIIDQQFFPSAAEFVVYKLKEMGKINQEDISAVME 346

Query: 13  SLRK 2
           S RK
Sbjct: 347 SFRK 350


>ref|XP_004159125.1| PREDICTED: two-pore potassium channel 1-like [Cucumis sativus]
          Length = 342

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/107 (72%), Positives = 92/107 (85%)
 Frame = -1

Query: 322 STVTTLGYGDKSFSTAEGRVFAVFWILSGTICLAQFFLYLAELYTEGRQRSLAKMVLSRR 143
           ST+TTLGYGD+SFST  GRVFAV WI+SGTICLAQFFLYLAELYTE RQ SL   VLSR 
Sbjct: 218 STITTLGYGDQSFSTTAGRVFAVIWIMSGTICLAQFFLYLAELYTERRQESLVNWVLSRS 277

Query: 142 LSLSEFETADLDQDKVVSAAEFIVYKLKEMGKISQEDISVVMESLRK 2
           L+ S+ E ADLD DKVVSAAEF++YKLKEMGKI+QED+S ++++ +K
Sbjct: 278 LTYSDLEEADLDHDKVVSAAEFVIYKLKEMGKINQEDVSPILDTFKK 324


>ref|XP_004139602.1| PREDICTED: two-pore potassium channel 1-like [Cucumis sativus]
          Length = 342

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/107 (72%), Positives = 92/107 (85%)
 Frame = -1

Query: 322 STVTTLGYGDKSFSTAEGRVFAVFWILSGTICLAQFFLYLAELYTEGRQRSLAKMVLSRR 143
           ST+TTLGYGD+SFST  GRVFAV WI+SGTICLAQFFLYLAELYTE RQ SL   VLSR 
Sbjct: 218 STITTLGYGDQSFSTTAGRVFAVIWIMSGTICLAQFFLYLAELYTERRQESLVNWVLSRS 277

Query: 142 LSLSEFETADLDQDKVVSAAEFIVYKLKEMGKISQEDISVVMESLRK 2
           L+ S+ E ADLD DKVVSAAEF++YKLKEMGKI+QED+S ++++ +K
Sbjct: 278 LTYSDLEEADLDHDKVVSAAEFVIYKLKEMGKINQEDVSPILDTFKK 324


>ref|XP_002323126.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222867756|gb|EEF04887.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 318

 Score =  160 bits (404), Expect = 1e-37
 Identities = 81/107 (75%), Positives = 89/107 (83%)
 Frame = -1

Query: 322 STVTTLGYGDKSFSTAEGRVFAVFWILSGTICLAQFFLYLAELYTEGRQRSLAKMVLSRR 143
           S++TTLGYGD SFST  GRVFAVFWIL  TICLAQFFLYLAELYTE RQR L K VL+R 
Sbjct: 192 SSITTLGYGDDSFSTRAGRVFAVFWILCSTICLAQFFLYLAELYTEKRQRLLVKRVLARN 251

Query: 142 LSLSEFETADLDQDKVVSAAEFIVYKLKEMGKISQEDISVVMESLRK 2
           ++ S+ E AD+D DK VSAAEFIVY LKEMGKISQEDIS+VME  RK
Sbjct: 252 VTASDLEEADIDHDKTVSAAEFIVYTLKEMGKISQEDISLVMERFRK 298


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