BLASTX nr result

ID: Glycyrrhiza23_contig00034210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034210
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat...   147   7e-34
ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   144   8e-33
ref|XP_003612377.1| Selenium binding protein-like protein [Medic...   134   1e-29
ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat...   116   2e-24
ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat...   107   8e-22

>ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240-like [Glycine max]
          Length = 563

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/85 (82%), Positives = 75/85 (88%)
 Frame = -1

Query: 256 MLASAILEMYGKCGSLSTARDLFDKMPQRNNVAWNCMINAYNQYERHQEALDLFFDMWGA 77
           +LA+AILEMY KCG L  ARDLF+KMPQRN V+WN MINAYNQYERHQEALDLFFDMW +
Sbjct: 248 ILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWTS 307

Query: 76  GFCPDKATFLIVLSVCAHQCALALG 2
           G  PDKATFL VLSVCAHQCALALG
Sbjct: 308 GVYPDKATFLSVLSVCAHQCALALG 332



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/76 (35%), Positives = 41/76 (53%)
 Frame = -1

Query: 250 ASAILEMYGKCGSLSTARDLFDKMPQRNNVAWNCMINAYNQYERHQEALDLFFDMWGAGF 71
           A+ +L MY  C  + +   +FD +P+ N VAW C+I  Y +  +  EAL +F DM     
Sbjct: 142 ATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQPYEALKVFEDMSHWNV 201

Query: 70  CPDKATFLIVLSVCAH 23
            P++ T +  L  CAH
Sbjct: 202 EPNEITMVNALIACAH 217



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = -1

Query: 253 LASAILEMYGKCGSLSTARDLFDKMPQRNNVAWNCMINAYNQYERHQEALDLFFDMW-GA 77
           LA+A+L+MY K G L  A+ +F  + +++ V W  MIN    +    EAL +F  M   +
Sbjct: 350 LATALLDMYAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDS 409

Query: 76  GFCPDKATFLIVLSVCAH 23
              PD  T++ VL  C+H
Sbjct: 410 SLVPDHITYIGVLFACSH 427


>ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g05240-like [Glycine max]
          Length = 552

 Score =  144 bits (363), Expect = 8e-33
 Identities = 68/85 (80%), Positives = 74/85 (87%)
 Frame = -1

Query: 256 MLASAILEMYGKCGSLSTARDLFDKMPQRNNVAWNCMINAYNQYERHQEALDLFFDMWGA 77
           +LA+AILEMY KCGS   ARDLF+KMPQRN V+WN MINAYNQYERH+EALDLFFDMW +
Sbjct: 237 ILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMWTS 296

Query: 76  GFCPDKATFLIVLSVCAHQCALALG 2
           G  PDKATFL VLSVCAH CALALG
Sbjct: 297 GIYPDKATFLSVLSVCAHLCALALG 321



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = -1

Query: 253 LASAILEMYGKCGSLSTARDLFDKMPQRNNVAWNCMINAYNQYERHQEALDLFFDMW-GA 77
           LA+A+L+MY K G L +A+ +F  + +R+ V W  MIN    +    EAL +F  M   +
Sbjct: 339 LATALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDS 398

Query: 76  GFCPDKATFLIVLSVCAH 23
              PD  T++ VL  C+H
Sbjct: 399 SLVPDHITYIGVLFACSH 416


>ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
           gi|355513712|gb|AES95335.1| Selenium binding
           protein-like protein [Medicago truncatula]
          Length = 611

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/85 (74%), Positives = 72/85 (84%)
 Frame = -1

Query: 256 MLASAILEMYGKCGSLSTARDLFDKMPQRNNVAWNCMINAYNQYERHQEALDLFFDMWGA 77
           +LA+AI+EMY KCG L+ AR+LF+KMP+RN VAWNCMINAYNQYER+ EAL LFF M   
Sbjct: 251 ILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLAN 310

Query: 76  GFCPDKATFLIVLSVCAHQCALALG 2
           GFCPDKATFL VLSVCA +C LALG
Sbjct: 311 GFCPDKATFLSVLSVCARRCVLALG 335



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/76 (35%), Positives = 47/76 (61%)
 Frame = -1

Query: 253 LASAILEMYGKCGSLSTARDLFDKMPQRNNVAWNCMINAYNQYERHQEALDLFFDMWGAG 74
           +A+ +L MY +C ++ +   +FDK+P+ N VAW C+IN Y   ++ +EAL++F +M   G
Sbjct: 144 VATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWG 203

Query: 73  FCPDKATFLIVLSVCA 26
              ++ T +  L  CA
Sbjct: 204 VEANEVTMVNALIACA 219


>ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240 [Vitis vinifera]
          Length = 565

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/85 (68%), Positives = 65/85 (76%)
 Frame = -1

Query: 256 MLASAILEMYGKCGSLSTARDLFDKMPQRNNVAWNCMINAYNQYERHQEALDLFFDMWGA 77
           +LA+AI++MY KCGSL TARDLF+KMP RN VAWN MI AYNQY +  EALDLF DM  A
Sbjct: 249 ILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIA 308

Query: 76  GFCPDKATFLIVLSVCAHQCALALG 2
           GF PDKATFL V+  CAH  AL  G
Sbjct: 309 GFDPDKATFLCVIGACAHLGALVSG 333


>ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240-like [Cucumis sativus]
           gi|449525900|ref|XP_004169954.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g05240-like [Cucumis sativus]
          Length = 562

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/78 (66%), Positives = 61/78 (78%)
 Frame = -1

Query: 256 MLASAILEMYGKCGSLSTARDLFDKMPQRNNVAWNCMINAYNQYERHQEALDLFFDMWGA 77
           +LA+AI++MY KCG L TAR+LFDKMPQRN V WN MI+AY+QY R  EAL LF DM  A
Sbjct: 249 ILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQYGRGAEALRLFVDMEMA 308

Query: 76  GFCPDKATFLIVLSVCAH 23
           GF P+KATFL V+S C H
Sbjct: 309 GFVPNKATFLSVISACTH 326


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