BLASTX nr result
ID: Glycyrrhiza23_contig00034199
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00034199
(503 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003549029.1| PREDICTED: pentatricopeptide repeat-containi... 234 7e-60
ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi... 169 2e-40
emb|CBI32673.3| unnamed protein product [Vitis vinifera] 169 2e-40
emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera] 167 1e-39
ref|XP_002308477.1| predicted protein [Populus trichocarpa] gi|2... 150 1e-34
>ref|XP_003549029.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Glycine max]
Length = 506
Score = 234 bits (596), Expect = 7e-60
Identities = 116/162 (71%), Positives = 138/162 (85%)
Frame = +1
Query: 16 LTETLHAQATKRDTNVVQTNIQPCSLDSTSFHVACHMFEEMSDLTVSSATAIIGGFAKWH 195
+T+T HA ATK + +V ++I P +LDST+FHVAC +FEEMSDLTV+SAT +I GF K H
Sbjct: 1 MTKTHHANATKHEASVAHSDINPYNLDSTTFHVACQLFEEMSDLTVASATTMIQGFVKRH 60
Query: 196 CHEEAIYLFSRLLASKIIRPNEFTFGTVLHSSTVLGDVFVGRQLHACATKIGLGSHVFVG 375
CHE+AIYLFS++LASK IRPNEFTFGT+++SS LG+V VG+QLHACA KIGL HVFVG
Sbjct: 61 CHEDAIYLFSKMLASK-IRPNEFTFGTLINSSAALGNVVVGKQLHACAMKIGLSCHVFVG 119
Query: 376 SALLDLYVKLSSTMEEAQKAFEDTQHPNVVSYTTLICGYLKR 501
S+LLDLY K ST+E+AQKAF DTQHPNVVSYTTLICGYLKR
Sbjct: 120 SSLLDLYFK-QSTIEDAQKAFGDTQHPNVVSYTTLICGYLKR 160
Score = 76.3 bits (186), Expect = 2e-12
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +1
Query: 58 NVVQTNIQPCS-LDSTSFHVACHMFEEMSDLTVSSATAIIGGFAKWHCHEEAIYLFSRLL 234
NVV C L F A +F EM + V S A++GG ++ +EEA+ F +L
Sbjct: 146 NVVSYTTLICGYLKRGRFEDALRVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIGML 205
Query: 235 ASKIIRPNEFTFGTVLHSSTVLGDVFVGRQLHACATKIGLGSHVFVGSALLDLYVKLSST 414
I PNE TF V+ ++ + + +G+ HACA K FVG++L+ Y K S
Sbjct: 206 REGFI-PNESTFPCVICAAANIASLGIGKSFHACAIKFLGKVDQFVGNSLISFYAKCGS- 263
Query: 415 MEEAQKAFEDTQHPNVVSYTTLICGY 492
ME++ F+ N+VS+ +ICGY
Sbjct: 264 MEDSLLMFDKLFKRNIVSWNAMICGY 289
>ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Vitis vinifera]
Length = 538
Score = 169 bits (428), Expect = 2e-40
Identities = 93/169 (55%), Positives = 122/169 (72%), Gaps = 2/169 (1%)
Frame = +1
Query: 1 VSCGYLTET--LHAQATKRDTNVVQTNIQPCSLDSTSFHVACHMFEEMSDLTVSSATAII 174
++C L E+ +H +A K T +++ +I S + AC +F+E+ + V SATA I
Sbjct: 24 LACNQLKESQRIHGRAIKLGTTILEPDIVCSYSASKALWDACKLFDEVPNWDVVSATATI 83
Query: 175 GGFAKWHCHEEAIYLFSRLLASKIIRPNEFTFGTVLHSSTVLGDVFVGRQLHACATKIGL 354
G FA++H HEEAIY FSR+LA I +PN+F+FGTV+ SST L D+ GRQLHACA K+GL
Sbjct: 84 GCFARYHHHEEAIYFFSRMLALNI-KPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGL 142
Query: 355 GSHVFVGSALLDLYVKLSSTMEEAQKAFEDTQHPNVVSYTTLICGYLKR 501
S+VFVGSA++D Y KL+S + EAQKAFEDT PNVVSYTTLI GYLK+
Sbjct: 143 ESNVFVGSAVVDFYAKLTS-INEAQKAFEDTHEPNVVSYTTLIRGYLKK 190
Score = 73.2 bits (178), Expect = 2e-11
Identities = 55/163 (33%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Frame = +1
Query: 16 LTETLHAQATKRDT---NVVQ-TNIQPCSLDSTSFHVACHMFEEMSDLTVSSATAIIGGF 183
LT AQ DT NVV T + L F A +F +M + V S A+I G+
Sbjct: 159 LTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGY 218
Query: 184 AKWHCHEEAIYLFSRLLASKIIRPNEFTFGTVLHSSTVLGDVFVGRQLHACATKIGLGSH 363
++ +EEA+ LF +L + PNE TF + + + + +GR H A K
Sbjct: 219 SQMGYNEEAVNLFVVMLREGTL-PNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFD 277
Query: 364 VFVGSALLDLYVKLSSTMEEAQKAFEDTQHPNVVSYTTLICGY 492
VF+G++L+ Y K S MEE+ F N+VS+ LICGY
Sbjct: 278 VFIGNSLVSFYAKCGS-MEESLLVFNTLPKKNIVSWNALICGY 319
>emb|CBI32673.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 169 bits (428), Expect = 2e-40
Identities = 93/169 (55%), Positives = 122/169 (72%), Gaps = 2/169 (1%)
Frame = +1
Query: 1 VSCGYLTET--LHAQATKRDTNVVQTNIQPCSLDSTSFHVACHMFEEMSDLTVSSATAII 174
++C L E+ +H +A K T +++ +I S + AC +F+E+ + V SATA I
Sbjct: 305 LACNQLKESQRIHGRAIKLGTTILEPDIVCSYSASKALWDACKLFDEVPNWDVVSATATI 364
Query: 175 GGFAKWHCHEEAIYLFSRLLASKIIRPNEFTFGTVLHSSTVLGDVFVGRQLHACATKIGL 354
G FA++H HEEAIY FSR+LA I +PN+F+FGTV+ SST L D+ GRQLHACA K+GL
Sbjct: 365 GCFARYHHHEEAIYFFSRMLALNI-KPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGL 423
Query: 355 GSHVFVGSALLDLYVKLSSTMEEAQKAFEDTQHPNVVSYTTLICGYLKR 501
S+VFVGSA++D Y KL+S + EAQKAFEDT PNVVSYTTLI GYLK+
Sbjct: 424 ESNVFVGSAVVDFYAKLTS-INEAQKAFEDTHEPNVVSYTTLIRGYLKK 471
Score = 73.2 bits (178), Expect = 2e-11
Identities = 55/163 (33%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Frame = +1
Query: 16 LTETLHAQATKRDT---NVVQ-TNIQPCSLDSTSFHVACHMFEEMSDLTVSSATAIIGGF 183
LT AQ DT NVV T + L F A +F +M + V S A+I G+
Sbjct: 440 LTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGY 499
Query: 184 AKWHCHEEAIYLFSRLLASKIIRPNEFTFGTVLHSSTVLGDVFVGRQLHACATKIGLGSH 363
++ +EEA+ LF +L + PNE TF + + + + +GR H A K
Sbjct: 500 SQMGYNEEAVNLFVVMLREGTL-PNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFD 558
Query: 364 VFVGSALLDLYVKLSSTMEEAQKAFEDTQHPNVVSYTTLICGY 492
VF+G++L+ Y K S MEE+ F N+VS+ LICGY
Sbjct: 559 VFIGNSLVSFYAKCGS-MEESLLVFNTLPKKNIVSWNALICGY 600
>emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
Length = 795
Score = 167 bits (422), Expect = 1e-39
Identities = 92/169 (54%), Positives = 120/169 (71%), Gaps = 2/169 (1%)
Frame = +1
Query: 1 VSCGYLTET--LHAQATKRDTNVVQTNIQPCSLDSTSFHVACHMFEEMSDLTVSSATAII 174
++C L E+ H +A K T +++ +I S AC +F+E+ + V SATA I
Sbjct: 281 LACNQLKESQRAHGRAVKLGTTILEPDIVCSYSASKELWDACKLFDEVPNWDVVSATATI 340
Query: 175 GGFAKWHCHEEAIYLFSRLLASKIIRPNEFTFGTVLHSSTVLGDVFVGRQLHACATKIGL 354
G FA++H HEEAIY FSR+LA I +PN+F+FGTV+ S+T L D+ GRQLHACA K+GL
Sbjct: 341 GCFARYHHHEEAIYFFSRMLALNI-KPNQFSFGTVIPSATALQDLNSGRQLHACAIKMGL 399
Query: 355 GSHVFVGSALLDLYVKLSSTMEEAQKAFEDTQHPNVVSYTTLICGYLKR 501
S+VFVGSA++D Y KL+S + EAQKAFEDT PNVVSYTTLI GYLK+
Sbjct: 400 ESNVFVGSAVVDFYAKLTS-INEAQKAFEDTHEPNVVSYTTLIRGYLKK 447
Score = 72.4 bits (176), Expect = 4e-11
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Frame = +1
Query: 16 LTETLHAQATKRDT---NVVQ-TNIQPCSLDSTSFHVACHMFEEMSDLTVSSATAIIGGF 183
LT AQ DT NVV T + L F A +F M + V S A+I G+
Sbjct: 416 LTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRXMPERNVVSWNAMISGY 475
Query: 184 AKWHCHEEAIYLFSRLLASKIIRPNEFTFGTVLHSSTVLGDVFVGRQLHACATKIGLGSH 363
++ +EEA+ LF +L + PNE TF + + + + +GR H A K
Sbjct: 476 SQMGYNEEAVNLFVVMLREGXL-PNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFD 534
Query: 364 VFVGSALLDLYVKLSSTMEEAQKAFEDTQHPNVVSYTTLICGY 492
VF+G++L+ Y K S MEE+ F N+VS+ LICGY
Sbjct: 535 VFIGNSLVSFYAKCGS-MEESLLVFNTLPKKNIVSWNALICGY 576
>ref|XP_002308477.1| predicted protein [Populus trichocarpa] gi|222854453|gb|EEE92000.1|
predicted protein [Populus trichocarpa]
Length = 504
Score = 150 bits (379), Expect = 1e-34
Identities = 80/129 (62%), Positives = 97/129 (75%)
Frame = +1
Query: 115 ACHMFEEMSDLTVSSATAIIGGFAKWHCHEEAIYLFSRLLASKIIRPNEFTFGTVLHSST 294
A +F+ + DL V SAT IIG FA+ H + EAI LFSR+L + PNEFTFGTV+HSST
Sbjct: 46 ALQVFDTIPDLDVVSATTIIGQFARLHQYREAIQLFSRMLFLNVT-PNEFTFGTVIHSST 104
Query: 295 VLGDVFVGRQLHACATKIGLGSHVFVGSALLDLYVKLSSTMEEAQKAFEDTQHPNVVSYT 474
LGD+ +GRQ ACA K+GL VFVGSA+LD Y KL S ++EAQ+AFED QHPN+VSYT
Sbjct: 105 SLGDLNLGRQFQACAMKMGLNYMVFVGSAVLDSYAKLGS-IQEAQRAFEDIQHPNIVSYT 163
Query: 475 TLICGYLKR 501
LI GYLK+
Sbjct: 164 ALIHGYLKK 172
Score = 75.1 bits (183), Expect = 5e-12
Identities = 40/129 (31%), Positives = 74/129 (57%)
Frame = +1
Query: 106 FHVACHMFEEMSDLTVSSATAIIGGFAKWHCHEEAIYLFSRLLASKIIRPNEFTFGTVLH 285
F A +F++M + + + A+IGGF++ +EEA+ LF ++ ++ P ++TF +
Sbjct: 175 FEEAFELFKQMPERNIVTWNAMIGGFSQMGQNEEAVNLFVEMIREGLV-PCQYTFPCAII 233
Query: 286 SSTVLGDVFVGRQLHACATKIGLGSHVFVGSALLDLYVKLSSTMEEAQKAFEDTQHPNVV 465
++ + + +GR HACA K VFVG++L+ Y K S ME++ + F + +V
Sbjct: 234 AAANIAALEMGRSFHACAIKTMGEFSVFVGNSLISFYAKCGS-MEDSLRLFYELPERTIV 292
Query: 466 SYTTLICGY 492
S+ +ICG+
Sbjct: 293 SWNAVICGF 301