BLASTX nr result

ID: Glycyrrhiza23_contig00034197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034197
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525748.1| PREDICTED: F-box/kelch-repeat protein At3g27...   138   5e-31
ref|XP_002328886.1| f-box family protein [Populus trichocarpa] g...   111   5e-23
ref|XP_002298618.1| f-box family protein [Populus trichocarpa] g...   110   2e-22
ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27...   109   2e-22
emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]   108   4e-22

>ref|XP_003525748.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Glycine max]
          Length = 394

 Score =  138 bits (347), Expect = 5e-31
 Identities = 60/82 (73%), Positives = 72/82 (87%)
 Frame = +2

Query: 2   RNWCVFDGNFRARKMLPIIPSDYKFECGDKESFSAGTHLFVSGMEMDGAVIWRYQLETNE 181
           +NWC FDG+FR+ + LPIIPSDY FE G+KESFSAGT++FVSG E+DG V+WRY+L TNE
Sbjct: 108 KNWCAFDGHFRSCRKLPIIPSDYNFEWGNKESFSAGTYIFVSGKEVDGGVVWRYELATNE 167

Query: 182 WFKGPSMLTPRCLFASASIGTL 247
           WFKGPSML+ RCLFASAS GT+
Sbjct: 168 WFKGPSMLSQRCLFASASCGTM 189


>ref|XP_002328886.1| f-box family protein [Populus trichocarpa]
           gi|222839316|gb|EEE77653.1| f-box family protein
           [Populus trichocarpa]
          Length = 389

 Score =  111 bits (278), Expect = 5e-23
 Identities = 49/80 (61%), Positives = 60/80 (75%)
 Frame = +2

Query: 2   RNWCVFDGNFRARKMLPIIPSDYKFECGDKESFSAGTHLFVSGMEMDGAVIWRYQLETNE 181
           ++W  FD  F +R+ LP IP+D  F  GDKES  AGTHL +SG E++G V+WRY+LETN 
Sbjct: 103 KSWWAFDQQFSSRRKLPDIPADCCFSFGDKESICAGTHLIISGREIEGVVVWRYELETNS 162

Query: 182 WFKGPSMLTPRCLFASASIG 241
           W KGPSM+ PRCLFASAS G
Sbjct: 163 WNKGPSMINPRCLFASASCG 182


>ref|XP_002298618.1| f-box family protein [Populus trichocarpa]
           gi|222845876|gb|EEE83423.1| f-box family protein
           [Populus trichocarpa]
          Length = 390

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/80 (60%), Positives = 60/80 (75%)
 Frame = +2

Query: 2   RNWCVFDGNFRARKMLPIIPSDYKFECGDKESFSAGTHLFVSGMEMDGAVIWRYQLETNE 181
           ++W  FD  F +R+ LP +P+D  F  GDKES  AGTHL +SG E++G V+WRY+LETN 
Sbjct: 103 KSWWAFDRQFCSRRKLPDLPADCCFSFGDKESLCAGTHLIISGREIEGVVVWRYELETNS 162

Query: 182 WFKGPSMLTPRCLFASASIG 241
           W KGPSM+ PRCLFASAS G
Sbjct: 163 WNKGPSMINPRCLFASASCG 182


>ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Vitis
           vinifera]
          Length = 437

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/79 (62%), Positives = 58/79 (73%)
 Frame = +2

Query: 5   NWCVFDGNFRARKMLPIIPSDYKFECGDKESFSAGTHLFVSGMEMDGAVIWRYQLETNEW 184
           +W  FD  F +R+ LPI+PSD  F   DKES  AGTHL VSG E +G VIWRY+L  N+W
Sbjct: 152 SWWAFDRQFESRRRLPILPSDPCFTSADKESVCAGTHLIVSGREFEGVVIWRYELAMNKW 211

Query: 185 FKGPSMLTPRCLFASASIG 241
           FKGPSML PRC+FASA+ G
Sbjct: 212 FKGPSMLNPRCMFASANCG 230


>emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]
          Length = 514

 Score =  108 bits (270), Expect = 4e-22
 Identities = 49/79 (62%), Positives = 57/79 (72%)
 Frame = +2

Query: 5   NWCVFDGNFRARKMLPIIPSDYKFECGDKESFSAGTHLFVSGMEMDGAVIWRYQLETNEW 184
           +W  FD  F  R+ LPI+PSD  F   DKES  AGTHL VSG E +G VIWRY+L  N+W
Sbjct: 229 SWWAFDRQFEYRRRLPILPSDPCFTSADKESVCAGTHLIVSGREFEGVVIWRYELAMNKW 288

Query: 185 FKGPSMLTPRCLFASASIG 241
           FKGPSML PRC+FASA+ G
Sbjct: 289 FKGPSMLNPRCMFASANCG 307


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