BLASTX nr result

ID: Glycyrrhiza23_contig00034180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034180
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547153.1| PREDICTED: squamosa promoter-binding protein...   133   1e-29
ref|XP_003541730.1| PREDICTED: squamosa promoter-binding protein...   133   1e-29
ref|XP_003593617.1| Squamosa promoter binding-like protein [Medi...   127   1e-27
gb|AFK36644.1| unknown [Lotus japonicus]                              114   1e-23
gb|AFK42236.1| unknown [Medicago truncatula]                          110   9e-23

>ref|XP_003547153.1| PREDICTED: squamosa promoter-binding protein 1-like [Glycine max]
          Length = 138

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/103 (68%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
 Frame = -2

Query: 306 MDESWGTEGKISYKYKXXXXXXXXXXXEVG-YGEDGRKRRVVTDLYSSKRGSKAGGSVPP 130
           MDESW +EGK S  YK           EV  Y +DGRK++VV    SSKRGSKAGGSVPP
Sbjct: 1   MDESW-SEGKRSMSYKEEDEYEEEEEEEVSEYRDDGRKKKVV----SSKRGSKAGGSVPP 55

Query: 129 SCQVDGCNADLSEAKQYHRRHKVCEYHAKAHSVLISEQHQRFC 1
           SCQVDGC+ADLSEAK YHRRHKVCEYHAKA +VLI +QHQRFC
Sbjct: 56  SCQVDGCSADLSEAKPYHRRHKVCEYHAKAPAVLIGDQHQRFC 98


>ref|XP_003541730.1| PREDICTED: squamosa promoter-binding protein 1-like [Glycine max]
          Length = 138

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/103 (67%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
 Frame = -2

Query: 306 MDESWGTEGKISYKYKXXXXXXXXXXXEVG-YGEDGRKRRVVTDLYSSKRGSKAGGSVPP 130
           MD SW +EGK S  YK           EV  YG+DG+K+RVV    S+KRGSKAGGSVPP
Sbjct: 1   MDGSW-SEGKRSMSYKEEDEYEEEEEEEVSEYGDDGKKKRVV----SNKRGSKAGGSVPP 55

Query: 129 SCQVDGCNADLSEAKQYHRRHKVCEYHAKAHSVLISEQHQRFC 1
           SCQVDGCNADLSEAK YHRRHKVCEYHAKA +V+I +QHQRFC
Sbjct: 56  SCQVDGCNADLSEAKPYHRRHKVCEYHAKAPAVVIGDQHQRFC 98


>ref|XP_003593617.1| Squamosa promoter binding-like protein [Medicago truncatula]
           gi|355482665|gb|AES63868.1| Squamosa promoter
           binding-like protein [Medicago truncatula]
           gi|388516139|gb|AFK46131.1| unknown [Medicago
           truncatula] gi|388520663|gb|AFK48393.1| unknown
           [Medicago truncatula]
          Length = 143

 Score =  127 bits (318), Expect = 1e-27
 Identities = 66/106 (62%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
 Frame = -2

Query: 306 MDESWGTEGKISYKYKXXXXXXXXXXXE----VGYGEDGRKRRVVTDLYSSKRGSKAGGS 139
           MD SWG EGK  Y+Y+           E    V YG+D +++RVVTD   +K+GSKAGGS
Sbjct: 1   MDGSWG-EGKRIYEYREENEYEVEVEIEEEEDVSYGDDEKRKRVVTDHLYNKKGSKAGGS 59

Query: 138 VPPSCQVDGCNADLSEAKQYHRRHKVCEYHAKAHSVLISEQHQRFC 1
           V PSCQVD CNADLS AKQYH+RHKVCE H+KAHSVLISE  QRFC
Sbjct: 60  VTPSCQVDNCNADLSAAKQYHKRHKVCENHSKAHSVLISELQQRFC 105


>gb|AFK36644.1| unknown [Lotus japonicus]
          Length = 153

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/75 (80%), Positives = 64/75 (85%), Gaps = 3/75 (4%)
 Frame = -2

Query: 216 YGEDG--RKRRVVTDLYSSKRGSKAGGS-VPPSCQVDGCNADLSEAKQYHRRHKVCEYHA 46
           YGEDG  +KR VVTDLYS KRG KAGGS VPPSCQV+GC ADLS AK YHRRHKVCE+HA
Sbjct: 36  YGEDGIRKKRVVVTDLYS-KRGFKAGGSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHA 94

Query: 45  KAHSVLISEQHQRFC 1
           KA SVL+SEQ QRFC
Sbjct: 95  KAPSVLLSEQQQRFC 109


>gb|AFK42236.1| unknown [Medicago truncatula]
          Length = 144

 Score =  110 bits (276), Expect = 9e-23
 Identities = 58/103 (56%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
 Frame = -2

Query: 300 ESWGTEGKISYKYKXXXXXXXXXXXEVGYGE--DGRKRRVVTDLYSSKRGSKAGGS-VPP 130
           E+  +EGK S KYK           +  + E  DGR++RVVTDLYS +   KAG S +PP
Sbjct: 2   ETRRSEGKRSLKYKEDHEEEEEEEEDTDFEEEEDGRRKRVVTDLYSKRSSKKAGSSNIPP 61

Query: 129 SCQVDGCNADLSEAKQYHRRHKVCEYHAKAHSVLISEQHQRFC 1
            CQV+ C+ADLSEAKQYHRRHKVCEYHAKA +V I+   QRFC
Sbjct: 62  CCQVENCDADLSEAKQYHRRHKVCEYHAKAPAVHIAGLQQRFC 104


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