BLASTX nr result

ID: Glycyrrhiza23_contig00034177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034177
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09806.1| Polynucleotidyl transferase, Ribonuclease H fold,...   102   4e-20
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...    94   9e-18
gb|ABE88099.1| conserved hypothetical protein [Medicago truncatula]    90   1e-17
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]        91   2e-17
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    83   8e-16

>gb|ABN09806.1| Polynucleotidyl transferase, Ribonuclease H fold, putative
           [Medicago truncatula]
          Length = 188

 Score =  102 bits (253), Expect = 4e-20
 Identities = 57/81 (70%), Positives = 61/81 (75%)
 Frame = -2

Query: 328 PALLYCDSQSARHIASNSSFHERTKHIDIDCHIVREKLQAKLFHLLPISSALQLADVFTK 149
           PALLY DSQSARHIASN +FHE TKHIDIDCH V EKLQA LFHLLPI+S  QLAD FTK
Sbjct: 102 PALLYRDSQSARHIASNPTFHECTKHIDIDCHFVCEKLQAHLFHLLPITSINQLADFFTK 161

Query: 148 PLELSSLWFPSLESCPSMLHL 86
            LE  S  F  L S   ML++
Sbjct: 162 QLE--SAPFQRLLSKHGMLNI 180


>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/81 (58%), Positives = 57/81 (70%)
 Frame = -2

Query: 328  PALLYCDSQSARHIASNSSFHERTKHIDIDCHIVREKLQAKLFHLLPISSALQLADVFTK 149
            P  +YCD++SA ++A N  FHERTKHI+IDCH++REK+Q  L HLLP+SSA QLADV TK
Sbjct: 1605 PISVYCDNKSAIYLAHNPIFHERTKHIEIDCHVIREKIQTGLIHLLPVSSAAQLADVLTK 1664

Query: 148  PLELSSLWFPSLESCPSMLHL 86
            PL       PS  S  S L L
Sbjct: 1665 PLPA-----PSFNSLISKLDL 1680


>gb|ABE88099.1| conserved hypothetical protein [Medicago truncatula]
          Length = 148

 Score = 90.1 bits (222), Expect(2) = 1e-17
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = -2

Query: 328 PALLYCDSQSARHIASNSSFHERTKHIDIDCHIVREKLQAKLFHLLPISSALQLADVFTK 149
           P +LYCD+QSA +IA+N  FHE TKH++IDCHIVREKLQA LF LLPISS  Q+AD FTK
Sbjct: 38  PPVLYCDNQSAIYIAANPVFHECTKHLEIDCHIVREKLQAGLFKLLPISSKDQVADFFTK 97

Query: 148 PL 143
            L
Sbjct: 98  SL 99



 Score = 24.3 bits (51), Expect(2) = 1e-17
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 137 FQPLVSKLGVMSIHAP 90
           F PL+SKLG++ I+ P
Sbjct: 104 FNPLLSKLGMLDIYHP 119


>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score = 90.5 bits (223), Expect(2) = 2e-17
 Identities = 42/62 (67%), Positives = 51/62 (82%)
 Frame = -2

Query: 322 LLYCDSQSARHIASNSSFHERTKHIDIDCHIVREKLQAKLFHLLPISSALQLADVFTKPL 143
           +LYCD+QSA HIASN  FHERTKH++IDCHIVREKLQA +F LLP+++  Q+ D FTK L
Sbjct: 529 VLYCDNQSAMHIASNPVFHERTKHLEIDCHIVREKLQAGIFKLLPVTTHDQIGDSFTKAL 588

Query: 142 EL 137
            L
Sbjct: 589 YL 590



 Score = 23.5 bits (49), Expect(2) = 2e-17
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 146 LGAFQPLVSKLGVMSIHAPP 87
           L  F  L+SKLG++ I+ PP
Sbjct: 590 LQPFSLLLSKLGMLDIYHPP 609


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 82.8 bits (203), Expect(2) = 8e-16
 Identities = 37/65 (56%), Positives = 50/65 (76%)
 Frame = -2

Query: 328  PALLYCDSQSARHIASNSSFHERTKHIDIDCHIVREKLQAKLFHLLPISSALQLADVFTK 149
            PA L+CDS++A HIA+N  +HERTKHI+IDCH+VRE++Q+       + S+ QLAD+FTK
Sbjct: 1379 PAKLFCDSKAALHIAANPVYHERTKHIEIDCHVVRERIQSGAIVTAHVPSSCQLADLFTK 1438

Query: 148  PLELS 134
            PL  S
Sbjct: 1439 PLNSS 1443



 Score = 25.4 bits (54), Expect(2) = 8e-16
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 137  FQPLVSKLGVMSIHAP 90
            F  L+SK GV+ IHAP
Sbjct: 1445 FHSLLSKFGVLDIHAP 1460


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