BLASTX nr result

ID: Glycyrrhiza23_contig00034172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034172
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596687.1| Disease-resistance protein [Medicago truncat...    71   2e-11
ref|NP_001241468.1| TMV resistance protein N-like [Glycine max] ...    63   4e-10
ref|XP_003596678.1| TIR-NBS-LRR-TIR type disease resistance prot...    57   6e-08
ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein ...    57   1e-07
ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein ...    58   3e-07

>ref|XP_003596687.1| Disease-resistance protein [Medicago truncatula]
           gi|355485735|gb|AES66938.1| Disease-resistance protein
           [Medicago truncatula]
          Length = 1288

 Score = 70.9 bits (172), Expect(2) = 2e-11
 Identities = 38/57 (66%), Positives = 44/57 (77%)
 Frame = -2

Query: 172 INSKLLCTRTGSRMIITTRDVHILKVIEAHAMYEVPLLDCNDARELFNRKAFKSEEQ 2
           IN KLLC   GSR+IITTRD HIL+V  A  ++EVPLL+ NDA ELF RKAFK E+Q
Sbjct: 362 INPKLLCR--GSRIIITTRDEHILRVYGADTVHEVPLLNSNDAYELFCRKAFKGEDQ 416



 Score = 22.3 bits (46), Expect(2) = 2e-11
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -3

Query: 222 IKVLIVLDNVEQEQEV 175
           IKVL+VLDN++  +++
Sbjct: 342 IKVLLVLDNIDHLEQL 357


>ref|NP_001241468.1| TMV resistance protein N-like [Glycine max]
           gi|223452617|gb|ACM89635.1| disease-resistance protein
           [Glycine max]
          Length = 563

 Score = 62.8 bits (151), Expect(2) = 4e-10
 Identities = 31/47 (65%), Positives = 38/47 (80%)
 Frame = -2

Query: 142 GSRMIITTRDVHILKVIEAHAMYEVPLLDCNDARELFNRKAFKSEEQ 2
           GSRMII TRD HILKV  AH +++V L++ NDAR+LF  KAFKSE+Q
Sbjct: 352 GSRMIIITRDEHILKVYGAHVIHKVSLMNDNDARKLFYSKAFKSEDQ 398



 Score = 26.2 bits (56), Expect(2) = 4e-10
 Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
 Frame = -3

Query: 225 NIKVLIVLDNV---EQEQEVV*IPN 160
           NIKVLI LDNV   EQ QE+   PN
Sbjct: 323 NIKVLIFLDNVDQIEQLQELAINPN 347


>ref|XP_003596678.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula] gi|355485726|gb|AES66929.1| TIR-NBS-LRR-TIR
           type disease resistance protein [Medicago truncatula]
          Length = 861

 Score = 56.6 bits (135), Expect(2) = 6e-08
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = -2

Query: 133 MIITTRDVHILKVIEAHAMYEVPLLDCNDARELFNRKAFKSEEQ 2
           +IIT+RD HIL+V  A  ++EVPLL+ NDA ELF+R AFK E+Q
Sbjct: 275 IIITSRDEHILRVYGADTVHEVPLLNSNDAYELFHRNAFKGEDQ 318



 Score = 25.0 bits (53), Expect(2) = 6e-08
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = -3

Query: 222 IKVLIVLDNVEQEQEVV 172
           IKVL+VLDN+ Q ++++
Sbjct: 259 IKVLVVLDNINQLEQLI 275


>ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
           gi|355511992|gb|AES93615.1| TIR-NBS-LRR type disease
           resistance protein [Medicago truncatula]
          Length = 1128

 Score = 57.0 bits (136), Expect(2) = 1e-07
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = -2

Query: 172 INSKLLCTRTGSRMIITTRDVHILKVIEAHAMYEVPLLDCNDARELFNRKAFKSE 8
           IN KLLC   GSR+IITTRD HILK   A  +YE  L+  ++A +L +RKAFKS+
Sbjct: 322 INPKLLCG--GSRIIITTRDEHILKQYGADVVYEAQLMSDSEALDLLHRKAFKSD 374



 Score = 23.9 bits (50), Expect(2) = 1e-07
 Identities = 8/17 (47%), Positives = 16/17 (94%)
 Frame = -3

Query: 225 NIKVLIVLDNVEQEQEV 175
           NIK+L+VLD+++Q +++
Sbjct: 301 NIKLLVVLDDIDQIEQL 317


>ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
           gi|355485727|gb|AES66930.1| TIR-NBS-LRR type disease
           resistance protein [Medicago truncatula]
          Length = 1406

 Score = 57.8 bits (138), Expect(2) = 3e-07
 Identities = 32/54 (59%), Positives = 38/54 (70%), Gaps = 8/54 (14%)
 Frame = -2

Query: 142 GSRMIITTRDVHILKVIEAH--------AMYEVPLLDCNDARELFNRKAFKSEE 5
           GSRMIITTR++HIL+V              YEVPLL+ NDARELF RKAFKS++
Sbjct: 565 GSRMIITTRNMHILRVYGEQLSLSHGTCVSYEVPLLNNNDARELFYRKAFKSKD 618



 Score = 21.2 bits (43), Expect(2) = 3e-07
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 225 NIKVLIVLDNVEQEQEV 175
           N K L+VLDNV+  ++V
Sbjct: 536 NRKFLVVLDNVDLLEQV 552


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