BLASTX nr result

ID: Glycyrrhiza23_contig00034167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034167
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containi...   130   9e-29
ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
emb|CBI28142.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19

>ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Glycine max]
          Length = 591

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/87 (72%), Positives = 69/87 (79%)
 Frame = -3

Query: 262 DFHYALRIFNHVQHPSLFIYNLMIKAFVKRGSFRRAISLFKQLREEEDGLWPDNYTYPYV 83
           DF+YA RIFNH+ HPSLFIYNLMIKAFVKRGS R AISLF+QLRE   G+WPDNYTYPYV
Sbjct: 57  DFNYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRER--GVWPDNYTYPYV 114

Query: 82  FKAIGCXXXXXXXXXVHAFVIKTGLEF 2
            K IGC         +HAFV+KTGLEF
Sbjct: 115 LKGIGCIGEVREGEKIHAFVVKTGLEF 141


>ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Glycine max]
          Length = 614

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/87 (71%), Positives = 68/87 (78%)
 Frame = -3

Query: 262 DFHYALRIFNHVQHPSLFIYNLMIKAFVKRGSFRRAISLFKQLREEEDGLWPDNYTYPYV 83
           DF+YA RIFN++  PSLFIYNLMIKAFVK GSFR AISLF+QLRE   G+WPDNYTYPYV
Sbjct: 57  DFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREH--GVWPDNYTYPYV 114

Query: 82  FKAIGCXXXXXXXXXVHAFVIKTGLEF 2
            K IGC         VHAFV+KTGLEF
Sbjct: 115 LKGIGCIGEVREGEKVHAFVVKTGLEF 141


>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Vitis vinifera]
          Length = 662

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/87 (62%), Positives = 66/87 (75%)
 Frame = -3

Query: 262 DFHYALRIFNHVQHPSLFIYNLMIKAFVKRGSFRRAISLFKQLREEEDGLWPDNYTYPYV 83
           + HYA RIFN++  P LFIYNL+IKAF K GSFR+A+ LF+QLREE  GL PDN+TYP+V
Sbjct: 81  NLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREE--GLSPDNFTYPFV 138

Query: 82  FKAIGCXXXXXXXXXVHAFVIKTGLEF 2
           FKAIGC         V+ FV+K+GLEF
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEF 165


>emb|CBI28142.3| unnamed protein product [Vitis vinifera]
          Length = 571

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/87 (62%), Positives = 66/87 (75%)
 Frame = -3

Query: 262 DFHYALRIFNHVQHPSLFIYNLMIKAFVKRGSFRRAISLFKQLREEEDGLWPDNYTYPYV 83
           + HYA RIFN++  P LFIYNL+IKAF K GSFR+A+ LF+QLREE  GL PDN+TYP+V
Sbjct: 81  NLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREE--GLSPDNFTYPFV 138

Query: 82  FKAIGCXXXXXXXXXVHAFVIKTGLEF 2
           FKAIGC         V+ FV+K+GLEF
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEF 165


>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/86 (52%), Positives = 61/86 (70%)
 Frame = -3

Query: 262 DFHYALRIFNHVQHPSLFIYNLMIKAFVKRGSFRRAISLFKQLREEEDGLWPDNYTYPYV 83
           +  YA +IFN+VQ PSLF+YN+M+K + KRG  R+ + LF+QLR  EDGLWPD +TYP+V
Sbjct: 146 NLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLR--EDGLWPDGFTYPFV 203

Query: 82  FKAIGCXXXXXXXXXVHAFVIKTGLE 5
            KAIGC         V  F++KTG++
Sbjct: 204 LKAIGCLRDVRQGEKVRGFIVKTGMD 229


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