BLASTX nr result
ID: Glycyrrhiza23_contig00034167
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00034167 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containi... 130 9e-29 ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containi... 125 5e-27 ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi... 110 1e-22 emb|CBI28142.3| unnamed protein product [Vitis vinifera] 110 1e-22 ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19 >ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like [Glycine max] Length = 591 Score = 130 bits (328), Expect = 9e-29 Identities = 63/87 (72%), Positives = 69/87 (79%) Frame = -3 Query: 262 DFHYALRIFNHVQHPSLFIYNLMIKAFVKRGSFRRAISLFKQLREEEDGLWPDNYTYPYV 83 DF+YA RIFNH+ HPSLFIYNLMIKAFVKRGS R AISLF+QLRE G+WPDNYTYPYV Sbjct: 57 DFNYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRER--GVWPDNYTYPYV 114 Query: 82 FKAIGCXXXXXXXXXVHAFVIKTGLEF 2 K IGC +HAFV+KTGLEF Sbjct: 115 LKGIGCIGEVREGEKIHAFVVKTGLEF 141 >ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like [Glycine max] Length = 614 Score = 125 bits (313), Expect = 5e-27 Identities = 62/87 (71%), Positives = 68/87 (78%) Frame = -3 Query: 262 DFHYALRIFNHVQHPSLFIYNLMIKAFVKRGSFRRAISLFKQLREEEDGLWPDNYTYPYV 83 DF+YA RIFN++ PSLFIYNLMIKAFVK GSFR AISLF+QLRE G+WPDNYTYPYV Sbjct: 57 DFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREH--GVWPDNYTYPYV 114 Query: 82 FKAIGCXXXXXXXXXVHAFVIKTGLEF 2 K IGC VHAFV+KTGLEF Sbjct: 115 LKGIGCIGEVREGEKVHAFVVKTGLEF 141 >ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like [Vitis vinifera] Length = 662 Score = 110 bits (275), Expect = 1e-22 Identities = 54/87 (62%), Positives = 66/87 (75%) Frame = -3 Query: 262 DFHYALRIFNHVQHPSLFIYNLMIKAFVKRGSFRRAISLFKQLREEEDGLWPDNYTYPYV 83 + HYA RIFN++ P LFIYNL+IKAF K GSFR+A+ LF+QLREE GL PDN+TYP+V Sbjct: 81 NLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREE--GLSPDNFTYPFV 138 Query: 82 FKAIGCXXXXXXXXXVHAFVIKTGLEF 2 FKAIGC V+ FV+K+GLEF Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEF 165 >emb|CBI28142.3| unnamed protein product [Vitis vinifera] Length = 571 Score = 110 bits (275), Expect = 1e-22 Identities = 54/87 (62%), Positives = 66/87 (75%) Frame = -3 Query: 262 DFHYALRIFNHVQHPSLFIYNLMIKAFVKRGSFRRAISLFKQLREEEDGLWPDNYTYPYV 83 + HYA RIFN++ P LFIYNL+IKAF K GSFR+A+ LF+QLREE GL PDN+TYP+V Sbjct: 81 NLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREE--GLSPDNFTYPFV 138 Query: 82 FKAIGCXXXXXXXXXVHAFVIKTGLEF 2 FKAIGC V+ FV+K+GLEF Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEF 165 >ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like, partial [Cucumis sativus] Length = 735 Score = 99.8 bits (247), Expect = 2e-19 Identities = 45/86 (52%), Positives = 61/86 (70%) Frame = -3 Query: 262 DFHYALRIFNHVQHPSLFIYNLMIKAFVKRGSFRRAISLFKQLREEEDGLWPDNYTYPYV 83 + YA +IFN+VQ PSLF+YN+M+K + KRG R+ + LF+QLR EDGLWPD +TYP+V Sbjct: 146 NLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLR--EDGLWPDGFTYPFV 203 Query: 82 FKAIGCXXXXXXXXXVHAFVIKTGLE 5 KAIGC V F++KTG++ Sbjct: 204 LKAIGCLRDVRQGEKVRGFIVKTGMD 229