BLASTX nr result

ID: Glycyrrhiza23_contig00034161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034161
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539580.1| PREDICTED: cyclic nucleotide-gated ion chann...   117   1e-24
ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion chann...   116   2e-24
ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   116   2e-24
ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion chann...   115   4e-24

>ref|XP_003539580.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 683

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/75 (77%), Positives = 61/75 (81%)
 Frame = -3

Query: 226 QRMLFVVRGHLQSNQVLRDGVKSYCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXX 47
           QRMLFVVRGHLQS+QVLRDGVKS+CMLGPGNFSGDELLSWCLRRPFIER           
Sbjct: 521 QRMLFVVRGHLQSSQVLRDGVKSFCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTL 580

Query: 46  XXXEAFGLEAEDVKY 2
              EAFGLEA+DVKY
Sbjct: 581 ETTEAFGLEAQDVKY 595


>ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 691

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/75 (78%), Positives = 60/75 (80%)
 Frame = -3

Query: 226 QRMLFVVRGHLQSNQVLRDGVKSYCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXX 47
           QRMLFVVRGHLQS+QVLRDGVKS CMLGPGNFSGDELLSWCLRRPFIER           
Sbjct: 529 QRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITL 588

Query: 46  XXXEAFGLEAEDVKY 2
              EAFGLEAEDVKY
Sbjct: 589 ETTEAFGLEAEDVKY 603


>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 687

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/75 (78%), Positives = 60/75 (80%)
 Frame = -3

Query: 226 QRMLFVVRGHLQSNQVLRDGVKSYCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXX 47
           QRMLFVVRGHLQS+QVLRDGVKS CMLGPGNFSGDELLSWCLRRPFIER           
Sbjct: 525 QRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTL 584

Query: 46  XXXEAFGLEAEDVKY 2
              EAFGLEAEDVKY
Sbjct: 585 ETTEAFGLEAEDVKY 599


>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/75 (78%), Positives = 60/75 (80%)
 Frame = -3

Query: 226 QRMLFVVRGHLQSNQVLRDGVKSYCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXX 47
           QRMLFVVRGHLQS+QVLRDGVKS CMLGPGNFSGDELLSWCLRRPFIER           
Sbjct: 473 QRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTL 532

Query: 46  XXXEAFGLEAEDVKY 2
              EAFGLEAEDVKY
Sbjct: 533 ETTEAFGLEAEDVKY 547


>ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Vitis
           vinifera]
          Length = 667

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/75 (77%), Positives = 60/75 (80%)
 Frame = -3

Query: 226 QRMLFVVRGHLQSNQVLRDGVKSYCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXX 47
           QRMLFVVRGHLQS+QVLRDGVKS CMLGPGNFSGDELLSWCLRRPFIER           
Sbjct: 505 QRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITL 564

Query: 46  XXXEAFGLEAEDVKY 2
              EAFGLEA+DVKY
Sbjct: 565 ETTEAFGLEADDVKY 579


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