BLASTX nr result
ID: Glycyrrhiza23_contig00034145
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00034145 (392 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi... 226 1e-57 ref|XP_003610936.1| Pentatricopeptide repeat-containing protein ... 214 6e-54 ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2... 204 8e-51 emb|CBI31329.3| unnamed protein product [Vitis vinifera] 195 3e-48 ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi... 195 3e-48 >ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490-like [Glycine max] Length = 723 Score = 226 bits (576), Expect = 1e-57 Identities = 107/130 (82%), Positives = 115/130 (88%) Frame = +2 Query: 2 RRDEVTYTSMIMGYGMRGEGETALKLFEEMCKLNIKPDQVTMVAVLTACSHSGLVAQGQL 181 +RDEVTYTSMI+GYGM+GEGET LKLFEEMCKL IKPD VTMVAVLTACSHSGLVAQGQ+ Sbjct: 482 KRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQV 541 Query: 182 LFKMMIQDYGIKPSTEHYSCMVDLFGRAGFLNKAKEVITGMPYKPTSAMWGTLIGACRIH 361 LFK MI +GI P EHY+CM DLFGRAG LNKAKE ITGMPYKPTSAMW TL+GACRIH Sbjct: 542 LFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIH 601 Query: 362 GDMVMGEWAA 391 G+ MGEWAA Sbjct: 602 GNTEMGEWAA 611 >ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355512271|gb|AES93894.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 812 Score = 214 bits (545), Expect = 6e-54 Identities = 103/130 (79%), Positives = 115/130 (88%) Frame = +2 Query: 2 RRDEVTYTSMIMGYGMRGEGETALKLFEEMCKLNIKPDQVTMVAVLTACSHSGLVAQGQL 181 R+DEVTYTSMIMGYG+ G+GETALKLF EM +LNIKPD VTMVAVL ACSHSGLVAQGQ+ Sbjct: 494 RKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQV 553 Query: 182 LFKMMIQDYGIKPSTEHYSCMVDLFGRAGFLNKAKEVITGMPYKPTSAMWGTLIGACRIH 361 LF+ MI+ YGI P EHYSCMVDLFGRAG L+KAKEVITGM KPTSA+W TLIGAC+IH Sbjct: 554 LFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIH 613 Query: 362 GDMVMGEWAA 391 G+ V+GEWAA Sbjct: 614 GNTVIGEWAA 623 >ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa] Length = 683 Score = 204 bits (518), Expect = 8e-51 Identities = 95/130 (73%), Positives = 113/130 (86%) Frame = +2 Query: 2 RRDEVTYTSMIMGYGMRGEGETALKLFEEMCKLNIKPDQVTMVAVLTACSHSGLVAQGQL 181 RRD+VTYTS+I GYG++GEG+TALKLF+EM K IKPDQVTMVAVL+ACSHSGLV +G + Sbjct: 444 RRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNV 503 Query: 182 LFKMMIQDYGIKPSTEHYSCMVDLFGRAGFLNKAKEVITGMPYKPTSAMWGTLIGACRIH 361 LF+ M YGI P+ EH+SCMVDLFGRAG LNKAK+VIT MPY+PT+AMW TL+GACRIH Sbjct: 504 LFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIH 563 Query: 362 GDMVMGEWAA 391 G+ +GEWAA Sbjct: 564 GNTEIGEWAA 573 >emb|CBI31329.3| unnamed protein product [Vitis vinifera] Length = 753 Score = 195 bits (496), Expect = 3e-48 Identities = 91/129 (70%), Positives = 105/129 (81%) Frame = +2 Query: 5 RDEVTYTSMIMGYGMRGEGETALKLFEEMCKLNIKPDQVTMVAVLTACSHSGLVAQGQLL 184 RD++TYTSMI GYGM+GEG+ ALKLFEEM IKPD +TM+AVL+ACSHSGLV QGQLL Sbjct: 458 RDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLL 517 Query: 185 FKMMIQDYGIKPSTEHYSCMVDLFGRAGFLNKAKEVITGMPYKPTSAMWGTLIGACRIHG 364 F+ M YG+ P EH++CM DLFGRAG LNKAKE+I MPYKPT AMW TLIGACRIH Sbjct: 518 FEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHR 577 Query: 365 DMVMGEWAA 391 + +GEWAA Sbjct: 578 NTEIGEWAA 586 >ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490-like [Vitis vinifera] Length = 748 Score = 195 bits (496), Expect = 3e-48 Identities = 91/129 (70%), Positives = 105/129 (81%) Frame = +2 Query: 5 RDEVTYTSMIMGYGMRGEGETALKLFEEMCKLNIKPDQVTMVAVLTACSHSGLVAQGQLL 184 RD++TYTSMI GYGM+GEG+ ALKLFEEM IKPD +TM+AVL+ACSHSGLV QGQLL Sbjct: 503 RDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLL 562 Query: 185 FKMMIQDYGIKPSTEHYSCMVDLFGRAGFLNKAKEVITGMPYKPTSAMWGTLIGACRIHG 364 F+ M YG+ P EH++CM DLFGRAG LNKAKE+I MPYKPT AMW TLIGACRIH Sbjct: 563 FEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHR 622 Query: 365 DMVMGEWAA 391 + +GEWAA Sbjct: 623 NTEIGEWAA 631