BLASTX nr result
ID: Glycyrrhiza23_contig00034143
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00034143
(577 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containi... 268 6e-70
ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containi... 243 2e-62
ref|XP_002523554.1| pentatricopeptide repeat-containing protein,... 232 3e-59
emb|CBI29622.3| unnamed protein product [Vitis vinifera] 128 8e-28
ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 126 2e-27
>ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 619
Score = 268 bits (684), Expect = 6e-70
Identities = 139/198 (70%), Positives = 157/198 (79%), Gaps = 6/198 (3%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR-----CDPD 166
DMYSKCG V SA +VFDEM ERDVFSWNSMMS YV NGLP +A+E+ G+M+ C+PD
Sbjct: 146 DMYSKCGDVGSARQVFDEMSERDVFSWNSMMSGYVWNGLPHKAVEVLGVMKKDGCGCEPD 205
Query: 167 VVTWNTVMDAYSRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVN 346
VVTWNTVMDAY RMG C EASRVF +I+DPNVISWT LI+GY+ VG HDV+L IFR+MVN
Sbjct: 206 VVTWNTVMDAYCRMGQCCEASRVFGEIEDPNVISWTILISGYAGVGRHDVSLGIFRQMVN 265
Query: 347 AGMVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWR 523
GMV PDV+ALSG+LVSCR LG LASG+EIHGYGLK + FY SAGAALL LYA R
Sbjct: 266 VGMVSPDVDALSGVLVSCRHLGALASGKEIHGYGLKIMCGDVFYRSAGAALLMLYAGWGR 325
Query: 524 PRDVENVFRGMDKSDVVT 577
+NVF MDKSDVVT
Sbjct: 326 LDCADNVFWRMDKSDVVT 343
>ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 243 bits (619), Expect = 2e-62
Identities = 121/196 (61%), Positives = 151/196 (77%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRC---DPDVV 172
DMYSK G V S RVFDEM ERDV SWNSM+S YVCNG E ++EL MR +PD+V
Sbjct: 167 DMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMV 226
Query: 173 TWNTVMDAYSRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
TWNTVMDAY RMGLC EA +FEQIK+PN+IS TTL++GYS +GNH+ +L IFREM++
Sbjct: 227 TWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRR 286
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNND-NAFYNSAGAALLTLYARCWRPR 529
+ FPD+++LS +LVSCR LG L G+EIHGYG+++ D ++FY SAGAALLT+Y +C R +
Sbjct: 287 VAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQ 346
Query: 530 DVENVFRGMDKSDVVT 577
D NVF MD+ DVVT
Sbjct: 347 DALNVFELMDRFDVVT 362
Score = 60.5 bits (145), Expect = 2e-07
Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 41/233 (17%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD----PDV 169
D Y + G + A +F+++ E ++ S +++S Y G E++L +F M PD+
Sbjct: 233 DAYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDL 292
Query: 170 VTWNTVMDAYSRMG--LCGE-----------------------------------ASRVF 238
+ ++V+ + +G +CG+ A VF
Sbjct: 293 DSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVF 352
Query: 239 EQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDL 418
E + +V++W +I G+ + +ALE F +M +G++ + +S +L +C DL
Sbjct: 353 ELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQI-TISTVLPAC----DL 407
Query: 419 ASGREIHGYGLKNNDNAFYNSAGAALLTLYARCWRPRDVENVFRGMDKSDVVT 577
SG+++H Y KN+ ++ AL+ +Y++C ++F M D+V+
Sbjct: 408 KSGKQVHAYITKNSFSSVI-PVWNALIHMYSKCGCIGTAYSIFSNMISRDLVS 459
>ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537116|gb|EEF38749.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 611
Score = 232 bits (592), Expect = 3e-59
Identities = 115/196 (58%), Positives = 145/196 (73%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVV 172
DMY KCG+ SA VF+EM ERD+FSWNSM+S YV NGL + A+EL MR D PDVV
Sbjct: 139 DMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVV 198
Query: 173 TWNTVMDAYSRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
TWNT+MDAY +MG EA V +QI+ PN+ISWTTLI+ YS +G HD++L +F++M+
Sbjct: 199 TWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIRE 258
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNNDN-AFYNSAGAALLTLYARCWRPR 529
+V PD++ L +LVSCR +G L SG+EIHGYG K N FY+SAGAALLT+YA+C R +
Sbjct: 259 VVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQ 318
Query: 530 DVENVFRGMDKSDVVT 577
D NVF MDKSD+VT
Sbjct: 319 DAINVFELMDKSDIVT 334
Score = 77.4 bits (189), Expect = 2e-12
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 35/176 (19%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---------- 154
MY+KCG ++ A VF+ M + D+ +WN+M+ +V L ++A+E F M+
Sbjct: 310 MYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTT 369
Query: 155 -------CDPD------------------VVTWNTVMDAYSRMGLCGEASRVFEQIKDPN 259
CD V WN V+ Y + G A +F + + +
Sbjct: 370 ISTILPVCDLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKD 429
Query: 260 VISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDLASG 427
V+SW T+I G+ G+ AL++ +EM+ +G +FP+ + +L +C G + G
Sbjct: 430 VVSWNTMIGGFGMHGHGQAALKLLKEMILSG-IFPNSTTFTSVLSACSHSGLVDEG 484
Score = 65.1 bits (157), Expect = 8e-09
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVVT 175
MY KCG V SA +F MP +DV SWN+M+ + +G + AL+L M P+ T
Sbjct: 408 MYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTT 467
Query: 176 WNTVMDAYSRMGLCGEASRVFEQIKD-----PNVISWTTLITGYSSVGNHDVALEIFREM 340
+ +V+ A S GL E R+F + + P + ++ ++ + G A+ +M
Sbjct: 468 FTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKM 527
Query: 341 VNAGMVFPDVEALSGILVSCRSLGDLASGR 430
+ PD +L +CR+ +L GR
Sbjct: 528 ----PLEPDKSIWGALLAACRAYQNLDFGR 553
Score = 63.2 bits (152), Expect = 3e-08
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Frame = +2
Query: 8 YSKCGHVESAARVFDEMPERDVFSWNSMMSCYV---CN--GLPERALELFGL-MRCDPDV 169
YSK G + + RVF +M R+V S + C V C G E+ G + + +
Sbjct: 238 YSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNT 297
Query: 170 VTWNT----VMDAYSRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFRE 337
V +++ ++ Y++ G +A VFE + ++++W +I G+ + A+E FRE
Sbjct: 298 VFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFRE 357
Query: 338 MVNAGMVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNNDNAFYNSAGAALLTLYARC 517
M + D +S IL C DL G IH Y K+ + + A++ +Y +C
Sbjct: 358 MQRMD-IKNDQTTISTILPVC----DLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKC 412
Query: 518 WRPRDVENVFRGMDKSDVVT 577
R +F M DVV+
Sbjct: 413 GCVRSAYTIFCSMPNKDVVS 432
>emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 128 bits (321), Expect = 8e-28
Identities = 70/191 (36%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Frame = +2
Query: 8 YSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFG-LMRCDPDVVTWNT 184
Y+K +E+A R FD MPER V SWN+M+S Y NGL E AL LF ++ + VTWN
Sbjct: 115 YAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNA 174
Query: 185 VMDAYSRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAGMVFP 364
++ AY R+G A ++F + NV++W ++I GY+ G +A+E+F+EM+ A + P
Sbjct: 175 MISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTP 234
Query: 365 DVEALSGILVSCRSLGDLASGREIHGYGLKNNDNAFYNSAGAALLTLYARCWRPRDVENV 544
D + ++ +C LG L G + + L N S A++ +Y+RC D + V
Sbjct: 235 DEVTMVSVISACGHLGALELGNWVVRF-LTENQIKLSISGHNAMIFMYSRCGSMEDAKRV 293
Query: 545 FRGMDKSDVVT 577
F+ M DVV+
Sbjct: 294 FQEMATRDVVS 304
Score = 81.6 bits (200), Expect = 8e-14
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---CDPDVVT 175
MYS+CG +E A RVF EM RDV S+N+++S + +G A+ L M+ +PD VT
Sbjct: 280 MYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVT 339
Query: 176 WNTVMDAYSRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALE---------- 325
+ V+ A S GL E +VFE IKDP + + ++ VG + A
Sbjct: 340 FIGVLTACSHAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPH 399
Query: 326 --IFREMVNAGMVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNNDNAFYNSAGAALL 499
++ ++NA + VE LG+LA+ + + L+ + NS LL
Sbjct: 400 AGVYGSLLNASRIHKQVE-----------LGELAANKL---FELEPD-----NSGNFILL 440
Query: 500 T-LYARCWRPRDVENVFRGMDKSDV 571
+ +YA R +DVE + M K V
Sbjct: 441 SNIYASAGRWKDVERIREAMKKGGV 465
Score = 58.9 bits (141), Expect = 6e-07
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Frame = +2
Query: 14 KCGHVESA--ARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCDPDVVTWNTV 187
K GH A +M R V WN+M+S Y +A LF +M + +V+TW +
Sbjct: 53 KLGHGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMP-ERNVITWTAM 111
Query: 188 MDAYSRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPD 367
+ Y+++ A R F+ + + +V+SW +++GY+ G + AL +F EM+ A + +
Sbjct: 112 VTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGA---YRN 168
Query: 368 VEALSGILVSCRSLGDLASGREI 436
+ ++ + +GDL S R++
Sbjct: 169 SVTWNAMISAYMRVGDLDSARKL 191
>ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 126 bits (317), Expect = 2e-27
Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 7/199 (3%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVV 172
DMY+KCG +E A +FD + ++++ SWN M+S Y NG PE+ + L MR PD V
Sbjct: 198 DMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQV 257
Query: 173 TWNTVMDAYSRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
T +T++ AY + G EA RVF + K+ +++ WT ++ GY+ G + AL +F EM+
Sbjct: 258 TMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML-LE 316
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHG----YGLKNNDNAFYNSAGAALLTLYARCW 520
+ PD LS ++ SC L L G+ +HG GL NN +AL+ +Y++C
Sbjct: 317 HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNN-----LLVSSALIDMYSKCG 371
Query: 521 RPRDVENVFRGMDKSDVVT 577
D +VF M +VV+
Sbjct: 372 FIDDARSVFNLMPTRNVVS 390
Score = 65.5 bits (158), Expect = 6e-09
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 10/200 (5%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLM---RCDPDVV 172
DMYSKCG ++ A VF+ MP R+V SWN+M+ NG + ALELF M + PD V
Sbjct: 365 DMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNV 424
Query: 173 TWNTVMDAYSRMGLCGEASRVFEQIKD-----PNVISWTTLITGYSSVGNHDVALEIFRE 337
T+ ++ A + F+ I + P + + ++ G + A+ + +
Sbjct: 425 TFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKN 484
Query: 338 MVNAGMVFPDVEALSGILVSCRSLGDLASGREI--HGYGLKNNDNAFYNSAGAALLTLYA 511
M + PD S +L C + GD+ + H + L Y L +YA
Sbjct: 485 MAHD----PDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPY----IMLSNMYA 536
Query: 512 RCWRPRDVENVFRGMDKSDV 571
R +DV +V M +V
Sbjct: 537 SMGRWKDVASVRNLMKSKNV 556
Score = 59.7 bits (143), Expect = 3e-07
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Frame = +2
Query: 68 DVFSWNSMMSCYVCNGLPERALELFGLMRCDPDVVTWNTVMDAYSRMGLCGEASRVFEQI 247
D F N ++ Y G A LF M D +WN ++ AY++ G F+++
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKM-LKRDXFSWNALLSAYAKSGSIQNLKATFDRM 115
Query: 248 KDPNVISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDLASG 427
+ +S+ T I G+S +LE+F+ M G P + IL + L DL G
Sbjct: 116 PFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE-PTEYTIVSILNASAQLLDLRYG 174
Query: 428 REIHGYGLKNN--DNAFYNSAGAALLTLYARCWRPRDVENVFRGMDKSDVVT 577
++IHG + N N F + AL +YA+C +F + K ++V+
Sbjct: 175 KQIHGSIIVRNFLGNVFIWN---ALTDMYAKCGEIEQARWLFDCLTKKNLVS 223