BLASTX nr result

ID: Glycyrrhiza23_contig00034138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034138
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41411.1| unknown [Medicago truncatula]                          121   7e-26
ref|XP_003528535.1| PREDICTED: homeobox-leucine zipper protein A...   118   4e-25
ref|XP_003556652.1| PREDICTED: homeobox-leucine zipper protein A...   110   2e-22
ref|XP_002280649.2| PREDICTED: homeobox-leucine zipper protein H...   100   9e-20
emb|CBI26907.3| unnamed protein product [Vitis vinifera]              100   1e-19

>gb|AFK41411.1| unknown [Medicago truncatula]
          Length = 198

 Score =  121 bits (303), Expect = 7e-26
 Identities = 65/98 (66%), Positives = 73/98 (74%)
 Frame = +2

Query: 2   SLELTMSVSGFASAPITFLPSSPVKKLDINRVPLLXXXXXXXXXXXXXXXXXXXGDTPRK 181
           +LELT+S+ GFAS+PI+FLPSS VKKLD+NRV +                    GDTPRK
Sbjct: 10  NLELTISIPGFASSPISFLPSSSVKKLDVNRVTI----EEEWMALEEEEESSVNGDTPRK 65

Query: 182 KLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRP 295
           KLRLTKEQS LLEESFR+NHTLNPKQKE LAMQLKLRP
Sbjct: 66  KLRLTKEQSHLLEESFRKNHTLNPKQKECLAMQLKLRP 103


>ref|XP_003528535.1| PREDICTED: homeobox-leucine zipper protein ATHB-17-like [Glycine
           max]
          Length = 213

 Score =  118 bits (296), Expect = 4e-25
 Identities = 68/98 (69%), Positives = 73/98 (74%)
 Frame = +2

Query: 2   SLELTMSVSGFASAPITFLPSSPVKKLDINRVPLLXXXXXXXXXXXXXXXXXXXGDTPRK 181
           SLELT+SV GFAS+P T LPSS VK+LDIN+VPL                    G+ PRK
Sbjct: 10  SLELTISVPGFASSP-TLLPSSSVKELDINQVPL---EEDWMASNMEDEEESSNGEPPRK 65

Query: 182 KLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRP 295
           KLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRP
Sbjct: 66  KLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRP 103


>ref|XP_003556652.1| PREDICTED: homeobox-leucine zipper protein ATHB-17-like [Glycine
           max]
          Length = 224

 Score =  110 bits (274), Expect = 2e-22
 Identities = 65/102 (63%), Positives = 71/102 (69%), Gaps = 4/102 (3%)
 Frame = +2

Query: 2   SLELTMSVSGFASAPITFLPSS----PVKKLDINRVPLLXXXXXXXXXXXXXXXXXXXGD 169
           +LELT+SV GFAS+P+    SS     VK+LDIN+VPL                    GD
Sbjct: 10  NLELTISVPGFASSPVLLPLSSVFGITVKELDINQVPL---EEDWMASNMEDEEEGSNGD 66

Query: 170 TPRKKLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRP 295
            PRKKLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRP
Sbjct: 67  PPRKKLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRP 108


>ref|XP_002280649.2| PREDICTED: homeobox-leucine zipper protein HOX3-like [Vitis
           vinifera]
          Length = 224

 Score =  100 bits (250), Expect = 9e-20
 Identities = 62/103 (60%), Positives = 69/103 (66%), Gaps = 5/103 (4%)
 Frame = +2

Query: 2   SLELTMSVSGFASAPITFLPSSP-----VKKLDINRVPLLXXXXXXXXXXXXXXXXXXXG 166
           SLELT+SV GF S+P   LPSS      V+ LDIN+VPL                    G
Sbjct: 10  SLELTISVPGFTSSPS--LPSSAEGVCGVRDLDINQVPL-GAEEEWTTGSMEDEEESGNG 66

Query: 167 DTPRKKLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRP 295
             PRKKLRL+K+QSRLLEESFRQNHTLNPKQKE+LAMQLKLRP
Sbjct: 67  GPPRKKLRLSKDQSRLLEESFRQNHTLNPKQKEALAMQLKLRP 109


>emb|CBI26907.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score =  100 bits (249), Expect = 1e-19
 Identities = 62/104 (59%), Positives = 69/104 (66%), Gaps = 6/104 (5%)
 Frame = +2

Query: 2   SLELTMSVSGFASAPITFLPSSP------VKKLDINRVPLLXXXXXXXXXXXXXXXXXXX 163
           SLELT+SV GF S+P   LPSS       V+ LDIN+VPL                    
Sbjct: 10  SLELTISVPGFTSSPS--LPSSAGEGVCGVRDLDINQVPL-GAEEEWTTGSMEDEEESGN 66

Query: 164 GDTPRKKLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRP 295
           G  PRKKLRL+K+QSRLLEESFRQNHTLNPKQKE+LAMQLKLRP
Sbjct: 67  GGPPRKKLRLSKDQSRLLEESFRQNHTLNPKQKEALAMQLKLRP 110


Top