BLASTX nr result

ID: Glycyrrhiza23_contig00034123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034123
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597706.1| WD repeat-containing protein [Medicago trunc...   137   1e-30
ref|XP_003542094.1| PREDICTED: uncharacterized WD repeat-contain...   129   2e-28
ref|XP_002303299.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_002516001.1| F-box and wd40 domain protein, putative [Ric...   119   3e-25
ref|XP_004151156.1| PREDICTED: notchless protein homolog 1-like ...   102   3e-20

>ref|XP_003597706.1| WD repeat-containing protein [Medicago truncatula]
           gi|355486754|gb|AES67957.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 436

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/97 (72%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2   ADSTSRVWGREQDGQHTCLAVLVGHRGPIRCVTAFMGLGLLGGRLVDEDNEDSCTVCTGS 181
           ADSTSRVW RE+DGQH CLAVL GHRGPIR VTAF+G    G  + ++DNEDSCTVCTGS
Sbjct: 342 ADSTSRVWSRERDGQHVCLAVLAGHRGPIRSVTAFLG----GCLVKEDDNEDSCTVCTGS 397

Query: 182 LDGVLKLWRVTHTKNV-NSDQCSSQSQAGTKYFELYK 289
           LDGVLKLWRVT TKN  +++QC   SQ G KYFELYK
Sbjct: 398 LDGVLKLWRVTLTKNAPDNNQC--LSQVGNKYFELYK 432


>ref|XP_003542094.1| PREDICTED: uncharacterized WD repeat-containing protein
           all2124-like [Glycine max]
          Length = 441

 Score =  129 bits (325), Expect = 2e-28
 Identities = 70/97 (72%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2   ADSTSRVWGREQDGQHTCLAVLVGHRGPIRCVTAFMGLGLLGGRLVDEDNEDS-CTVCTG 178
           ADSTSRVW REQDGQHTCLAVLVGHRGPIRCVTAF     LGGRL+ EDNEDS CT+CTG
Sbjct: 355 ADSTSRVWAREQDGQHTCLAVLVGHRGPIRCVTAF-----LGGRLL-EDNEDSCCTICTG 408

Query: 179 SLDGVLKLWRVTHTKNVNSDQCSSQSQAGTKYFELYK 289
           SLDGV KLWR+TH     ++ CS  S  G KYF+L K
Sbjct: 409 SLDGVFKLWRLTH-----NNHCS--SPPGAKYFDLCK 438


>ref|XP_002303299.1| predicted protein [Populus trichocarpa] gi|222840731|gb|EEE78278.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/94 (64%), Positives = 71/94 (75%)
 Frame = +2

Query: 2   ADSTSRVWGREQDGQHTCLAVLVGHRGPIRCVTAFMGLGLLGGRLVDEDNEDSCTVCTGS 181
           ADSTSRVW R+ DGQHTCLAVLVGHRGPIRCVTAF+G        +++DNED CT+CTGS
Sbjct: 157 ADSTSRVWVRDSDGQHTCLAVLVGHRGPIRCVTAFLG-------RLEDDNEDGCTICTGS 209

Query: 182 LDGVLKLWRVTHTKNVNSDQCSSQSQAGTKYFEL 283
           LDGVLKLWRVT T    + +  S SQ  + YF+L
Sbjct: 210 LDGVLKLWRVTRT----NKESGSLSQNASDYFDL 239


>ref|XP_002516001.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223544906|gb|EEF46421.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 333

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/94 (64%), Positives = 70/94 (74%)
 Frame = +2

Query: 2   ADSTSRVWGREQDGQHTCLAVLVGHRGPIRCVTAFMGLGLLGGRLVDEDNEDSCTVCTGS 181
           ADS+SRVW RE DGQHTCLAVL+GHRGP+RCVTA  GLG LG     +DNE+ CT+CTGS
Sbjct: 250 ADSSSRVWLRESDGQHTCLAVLIGHRGPVRCVTA--GLGRLG-----DDNEEECTICTGS 302

Query: 182 LDGVLKLWRVTHTKNVNSDQCSSQSQAGTKYFEL 283
           LDGV+KLWRVT T    S      S +G +YFEL
Sbjct: 303 LDGVIKLWRVTRT----SKDSGPLSTSGYEYFEL 332


>ref|XP_004151156.1| PREDICTED: notchless protein homolog 1-like [Cucumis sativus]
           gi|449525874|ref|XP_004169941.1| PREDICTED: notchless
           protein homolog 1-like [Cucumis sativus]
          Length = 450

 Score =  102 bits (255), Expect = 3e-20
 Identities = 56/96 (58%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
 Frame = +2

Query: 2   ADSTSRVWGREQ-DGQ-HTCLAVLVGHRGPIRCVTAFMGLGLLGGRLVDEDNEDSCTVCT 175
           ADST RVW R++ D Q HTCLAVLVGHRGP+RCV AF G    G     E+ E  CT+C+
Sbjct: 361 ADSTCRVWARDEVDCQLHTCLAVLVGHRGPVRCVAAFFG---SGSEEAVEEGEGGCTICS 417

Query: 176 GSLDGVLKLWRVTHTKNVNSDQCSSQSQAGTKYFEL 283
           GSLDGVLK+WRVT T N   +Q     Q GT YF+L
Sbjct: 418 GSLDGVLKVWRVTCTSNGTPNQ---DLQNGTDYFDL 450


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