BLASTX nr result

ID: Glycyrrhiza23_contig00034118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034118
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago ...    96   2e-18
ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat...    72   4e-11
ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat...    71   8e-11
ref|XP_002510334.1| pentatricopeptide repeat-containing protein,...    60   2e-07
ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat...    58   7e-07

>ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
           gi|355484638|gb|AES65841.1| hypothetical protein
           MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/76 (59%), Positives = 53/76 (69%)
 Frame = -2

Query: 230 RPHPRSYSLLLHILARARMFPEXXXXXXXXXXLHCPNNYRAFAVCNDVVTTYHELGFSPA 51
           RPH  SYS+LLHIL  AR+FPE          LHC NNYRA+AVCN V + Y E GF   
Sbjct: 98  RPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCSG 157

Query: 50  VFDMLLRAFAEKGMTR 3
           VFDML++AFAE+GMT+
Sbjct: 158 VFDMLMKAFAERGMTK 173


>ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/76 (50%), Positives = 49/76 (64%)
 Frame = -2

Query: 230 RPHPRSYSLLLHILARARMFPEXXXXXXXXXXLHCPNNYRAFAVCNDVVTTYHELGFSPA 51
           RP   SY  ++HIL+RARM+ E          L C NNY A AV +++V+ Y E  FSP 
Sbjct: 129 RPDVSSYCKIVHILSRARMYKEVRVYLNELVVL-CKNNYIASAVWDELVSVYREFSFSPT 187

Query: 50  VFDMLLRAFAEKGMTR 3
           VFDM+L+ FAEKGMT+
Sbjct: 188 VFDMILKVFAEKGMTK 203


>ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 567

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/76 (48%), Positives = 49/76 (64%)
 Frame = -2

Query: 230 RPHPRSYSLLLHILARARMFPEXXXXXXXXXXLHCPNNYRAFAVCNDVVTTYHELGFSPA 51
           RP   SY  ++HIL+RARM+ E          L C NNY A AV +++V+ Y E  FSP 
Sbjct: 129 RPDVSSYCKIVHILSRARMYKEVRVYLNELVVL-CKNNYIASAVWDELVSVYREFSFSPT 187

Query: 50  VFDMLLRAFAEKGMTR 3
           VFDM+L+ +AEKGMT+
Sbjct: 188 VFDMILKVYAEKGMTK 203


>ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551035|gb|EEF52521.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 947

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/76 (39%), Positives = 44/76 (57%)
 Frame = -2

Query: 230 RPHPRSYSLLLHILARARMFPEXXXXXXXXXXLHCPNNYRAFAVCNDVVTTYHELGFSPA 51
           RP+  S+  L+HIL+RARM+ E              NNY +  V N++V  + +  FSP 
Sbjct: 91  RPNVNSHCKLVHILSRARMYDETRSYLNELVTPS-KNNYSSLVVWNELVRVFEDFKFSPT 149

Query: 50  VFDMLLRAFAEKGMTR 3
           VFDM+L+ + EKGM +
Sbjct: 150 VFDMILKIYCEKGMIK 165


>ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/76 (39%), Positives = 44/76 (57%)
 Frame = -2

Query: 230 RPHPRSYSLLLHILARARMFPEXXXXXXXXXXLHCPNNYRAFAVCNDVVTTYHELGFSPA 51
           RP+ +SY  L+HIL+R RM+ E          L C    R   + +++V  Y E  FSP 
Sbjct: 99  RPNVKSYCKLVHILSRGRMYDETRAYLNQLVDL-CKFKDRGNVIWDELVGVYREFAFSPT 157

Query: 50  VFDMLLRAFAEKGMTR 3
           VFDM+L+ + EKG+T+
Sbjct: 158 VFDMILKVYVEKGLTK 173


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