BLASTX nr result

ID: Glycyrrhiza23_contig00034112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034112
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                              232   3e-59
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   197   1e-48
emb|CAN64782.1| hypothetical protein VITISV_003835 [Vitis vinifera]   197   1e-48
emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera]   196   2e-48
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...   194   6e-48

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  232 bits (591), Expect = 3e-59
 Identities = 108/119 (90%), Positives = 113/119 (94%)
 Frame = -1

Query: 359 EKMVQEMLEQGIIQPSTSPFSSPILLVKKKDGSWRFCTDYRALNAVTIKDSFPMPTVDEL 180
           EKM+QEML QGIIQPS SPFS PILLVKKKDGSWRFCTDYRALNA+T+KDSFPMPTVDEL
Sbjct: 614 EKMIQEMLVQGIIQPSNSPFSLPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDEL 673

Query: 179 LDELYGAKYFSKLDLRSGYHQILVQPSDRYKTAFHTHHGHYEWLVMPFGLTNAPATFQC 3
           LDEL+GA+YFSKLDLRSGYHQILVQP DR KTAF THHGHYEWLVMPFGLTNAPATFQC
Sbjct: 674 LDELHGAQYFSKLDLRSGYHQILVQPEDREKTAFRTHHGHYEWLVMPFGLTNAPATFQC 732


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  197 bits (500), Expect = 1e-48
 Identities = 89/118 (75%), Positives = 104/118 (88%)
 Frame = -1

Query: 359  EKMVQEMLEQGIIQPSTSPFSSPILLVKKKDGSWRFCTDYRALNAVTIKDSFPMPTVDEL 180
            E++++EML  GIIQPSTSPFSSP++LVKKKDGSWRFC DYRALN  T+ D +P+P +DEL
Sbjct: 708  ERLIKEMLAAGIIQPSTSPFSSPVILVKKKDGSWRFCVDYRALNKETVPDKYPIPVIDEL 767

Query: 179  LDELYGAKYFSKLDLRSGYHQILVQPSDRYKTAFHTHHGHYEWLVMPFGLTNAPATFQ 6
            LDEL+GA  FSKLDLR+GYHQILV+P D +KTAF TH GHYE+LVMPFGLTNAPATFQ
Sbjct: 768  LDELHGATVFSKLDLRAGYHQILVRPEDTHKTAFRTHEGHYEFLVMPFGLTNAPATFQ 825


>emb|CAN64782.1| hypothetical protein VITISV_003835 [Vitis vinifera]
          Length = 1575

 Score =  197 bits (500), Expect = 1e-48
 Identities = 88/118 (74%), Positives = 107/118 (90%)
 Frame = -1

Query: 359  EKMVQEMLEQGIIQPSTSPFSSPILLVKKKDGSWRFCTDYRALNAVTIKDSFPMPTVDEL 180
            EK VQ+ML+ G+++ ST+PFSSP+LLVKKKDG+WRFCT YRALNA TIKD FP+PTVD++
Sbjct: 795  EKQVQDMLQSGLVRSSTNPFSSPVLLVKKKDGNWRFCTYYRALNAATIKDRFPIPTVDDM 854

Query: 179  LDELYGAKYFSKLDLRSGYHQILVQPSDRYKTAFHTHHGHYEWLVMPFGLTNAPATFQ 6
            LDELYGA YF+KLDLR+GYHQ+ V+PSD +KTAF TH+GHYE+LVMPFGL NAP+TFQ
Sbjct: 855  LDELYGASYFTKLDLRAGYHQVRVKPSDIHKTAFRTHNGHYEYLVMPFGLCNAPSTFQ 912


>emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera]
          Length = 793

 Score =  196 bits (497), Expect = 2e-48
 Identities = 89/118 (75%), Positives = 107/118 (90%)
 Frame = -1

Query: 359 EKMVQEMLEQGIIQPSTSPFSSPILLVKKKDGSWRFCTDYRALNAVTIKDSFPMPTVDEL 180
           EK V++ML+ G+I+ STSPFSSP+LLVKKKDG+WRFCTDYRALNAVTIKD FP+PTVD++
Sbjct: 519 EKQVRDMLQLGLIRASTSPFSSPVLLVKKKDGTWRFCTDYRALNAVTIKDRFPIPTVDDM 578

Query: 179 LDELYGAKYFSKLDLRSGYHQILVQPSDRYKTAFHTHHGHYEWLVMPFGLTNAPATFQ 6
           LDEL+GA YF+KLDLR+GYHQ+ V P D  KTAF TH+GHYE+LVMPFGL+NAP+TFQ
Sbjct: 579 LDELHGATYFTKLDLRAGYHQVRVHPPDISKTAFRTHNGHYEYLVMPFGLSNAPSTFQ 636


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score =  194 bits (493), Expect = 6e-48
 Identities = 87/118 (73%), Positives = 104/118 (88%)
 Frame = -1

Query: 359  EKMVQEMLEQGIIQPSTSPFSSPILLVKKKDGSWRFCTDYRALNAVTIKDSFPMPTVDEL 180
            E  VQEML +GIIQPS+SPFSSP+LLVKKKDGSWRFC DYR LNA+T+K+ +P+P +DEL
Sbjct: 696  ESQVQEMLSKGIIQPSSSPFSSPVLLVKKKDGSWRFCVDYRHLNAITVKNKYPLPVIDEL 755

Query: 179  LDELYGAKYFSKLDLRSGYHQILVQPSDRYKTAFHTHHGHYEWLVMPFGLTNAPATFQ 6
            LDEL GA++FSKLDLRSGYHQI + P D +KTAF THHGH+E+ V+PFGLT+APATFQ
Sbjct: 756  LDELAGAQWFSKLDLRSGYHQIRMHPDDEHKTAFQTHHGHFEFRVLPFGLTSAPATFQ 813


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