BLASTX nr result

ID: Glycyrrhiza23_contig00034111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034111
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517521.1| PREDICTED: RNA-binding protein 8A-like [Glyc...    65   4e-09
ref|NP_001236162.1| uncharacterized protein LOC100527187 [Glycin...    64   2e-08
ref|XP_002513523.1| polyadenylate-binding protein, putative [Ric...    61   1e-07
ref|XP_003610955.1| RNA-binding protein 8A [Medicago truncatula]...    60   2e-07
ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...    59   4e-07

>ref|XP_003517521.1| PREDICTED: RNA-binding protein 8A-like [Glycine max]
          Length = 197

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/60 (58%), Positives = 38/60 (63%), Gaps = 10/60 (16%)
 Frame = +2

Query: 14  FDSLTTKGGPSPXXXXX----------MEEHEDDLQNAFDGYREIKDIHLNLDRRTGFVK 163
           FDSLTT+GGP P                E  EDDLQNAF  Y EIK++HLNLDRRTGFVK
Sbjct: 73  FDSLTTEGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEYGEIKNLHLNLDRRTGFVK 132


>ref|NP_001236162.1| uncharacterized protein LOC100527187 [Glycine max]
           gi|255631742|gb|ACU16238.1| unknown [Glycine max]
          Length = 204

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/60 (56%), Positives = 37/60 (61%), Gaps = 10/60 (16%)
 Frame = +2

Query: 14  FDSLTTKGGPSPXXXXX----------MEEHEDDLQNAFDGYREIKDIHLNLDRRTGFVK 163
           FDSLT +GGP P                E  EDDLQNAF  Y EIK++HLNLDRRTGFVK
Sbjct: 80  FDSLTAEGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEYGEIKNLHLNLDRRTGFVK 139


>ref|XP_002513523.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223547431|gb|EEF48926.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 199

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/60 (55%), Positives = 36/60 (60%), Gaps = 10/60 (16%)
 Frame = +2

Query: 14  FDSLTTKGGPSPXXXXX----------MEEHEDDLQNAFDGYREIKDIHLNLDRRTGFVK 163
           FDSL T GGP P                E  EDDLQNAF  + EIK++HLNLDRRTGFVK
Sbjct: 79  FDSLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVK 138


>ref|XP_003610955.1| RNA-binding protein 8A [Medicago truncatula]
           gi|355512290|gb|AES93913.1| RNA-binding protein 8A
           [Medicago truncatula] gi|388501280|gb|AFK38706.1|
           unknown [Medicago truncatula]
          Length = 193

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 10/60 (16%)
 Frame = +2

Query: 14  FDSLTTKGGPSPXXXXX----------MEEHEDDLQNAFDGYREIKDIHLNLDRRTGFVK 163
           FD+LT +GGP P                E  +DDLQNAF  Y +IK++HLNLDRRTGFVK
Sbjct: 72  FDTLTAEGGPGPQRSIEGWIILVTGVHEEAQDDDLQNAFGEYGDIKNLHLNLDRRTGFVK 131


>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/60 (51%), Positives = 36/60 (60%), Gaps = 10/60 (16%)
 Frame = +2

Query: 14  FDSLTTKGGPSPXXXXX----------MEEHEDDLQNAFDGYREIKDIHLNLDRRTGFVK 163
           FDSL + GGP P                E  EDDLQNAF  + E+K++HLNLDRRTGFVK
Sbjct: 80  FDSLDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEVKNLHLNLDRRTGFVK 139


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