BLASTX nr result
ID: Glycyrrhiza23_contig00034111
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00034111 (231 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003517521.1| PREDICTED: RNA-binding protein 8A-like [Glyc... 65 4e-09 ref|NP_001236162.1| uncharacterized protein LOC100527187 [Glycin... 64 2e-08 ref|XP_002513523.1| polyadenylate-binding protein, putative [Ric... 61 1e-07 ref|XP_003610955.1| RNA-binding protein 8A [Medicago truncatula]... 60 2e-07 ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin... 59 4e-07 >ref|XP_003517521.1| PREDICTED: RNA-binding protein 8A-like [Glycine max] Length = 197 Score = 65.5 bits (158), Expect = 4e-09 Identities = 35/60 (58%), Positives = 38/60 (63%), Gaps = 10/60 (16%) Frame = +2 Query: 14 FDSLTTKGGPSPXXXXX----------MEEHEDDLQNAFDGYREIKDIHLNLDRRTGFVK 163 FDSLTT+GGP P E EDDLQNAF Y EIK++HLNLDRRTGFVK Sbjct: 73 FDSLTTEGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEYGEIKNLHLNLDRRTGFVK 132 >ref|NP_001236162.1| uncharacterized protein LOC100527187 [Glycine max] gi|255631742|gb|ACU16238.1| unknown [Glycine max] Length = 204 Score = 63.5 bits (153), Expect = 2e-08 Identities = 34/60 (56%), Positives = 37/60 (61%), Gaps = 10/60 (16%) Frame = +2 Query: 14 FDSLTTKGGPSPXXXXX----------MEEHEDDLQNAFDGYREIKDIHLNLDRRTGFVK 163 FDSLT +GGP P E EDDLQNAF Y EIK++HLNLDRRTGFVK Sbjct: 80 FDSLTAEGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEYGEIKNLHLNLDRRTGFVK 139 >ref|XP_002513523.1| polyadenylate-binding protein, putative [Ricinus communis] gi|223547431|gb|EEF48926.1| polyadenylate-binding protein, putative [Ricinus communis] Length = 199 Score = 60.8 bits (146), Expect = 1e-07 Identities = 33/60 (55%), Positives = 36/60 (60%), Gaps = 10/60 (16%) Frame = +2 Query: 14 FDSLTTKGGPSPXXXXX----------MEEHEDDLQNAFDGYREIKDIHLNLDRRTGFVK 163 FDSL T GGP P E EDDLQNAF + EIK++HLNLDRRTGFVK Sbjct: 79 FDSLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVK 138 >ref|XP_003610955.1| RNA-binding protein 8A [Medicago truncatula] gi|355512290|gb|AES93913.1| RNA-binding protein 8A [Medicago truncatula] gi|388501280|gb|AFK38706.1| unknown [Medicago truncatula] Length = 193 Score = 60.1 bits (144), Expect = 2e-07 Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 10/60 (16%) Frame = +2 Query: 14 FDSLTTKGGPSPXXXXX----------MEEHEDDLQNAFDGYREIKDIHLNLDRRTGFVK 163 FD+LT +GGP P E +DDLQNAF Y +IK++HLNLDRRTGFVK Sbjct: 72 FDTLTAEGGPGPQRSIEGWIILVTGVHEEAQDDDLQNAFGEYGDIKNLHLNLDRRTGFVK 131 >ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera] gi|296088561|emb|CBI37552.3| unnamed protein product [Vitis vinifera] Length = 202 Score = 58.9 bits (141), Expect = 4e-07 Identities = 31/60 (51%), Positives = 36/60 (60%), Gaps = 10/60 (16%) Frame = +2 Query: 14 FDSLTTKGGPSPXXXXX----------MEEHEDDLQNAFDGYREIKDIHLNLDRRTGFVK 163 FDSL + GGP P E EDDLQNAF + E+K++HLNLDRRTGFVK Sbjct: 80 FDSLDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEVKNLHLNLDRRTGFVK 139