BLASTX nr result
ID: Glycyrrhiza23_contig00034090
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00034090 (299 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 69 3e-10 emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 62 5e-08 emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera] 62 6e-08 emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera] 59 4e-07 gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 57 2e-06 >gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon polyprotein from Arabidopsis arenosa [Arabidopsis thaliana] Length = 1194 Score = 69.3 bits (168), Expect = 3e-10 Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = +3 Query: 57 VKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRLGHPHLQVLKRV 230 VK L+TG LLQG+T+D++Y+ P++PP PS + + P +L WH RLGHP L LK V Sbjct: 380 VKDLKTGVQLLQGRTKDELYEWPVNPPKPSSHFTTTTPKTDLTSWHSRLGHPSLSTLKVV 439 Query: 231 I------XXXXXXXXXXCPDCLASKSH 293 + C DCL +K+H Sbjct: 440 VSQFSLPVSNSLQKQFNCSDCLLNKTH 466 >emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] Length = 1172 Score = 62.0 bits (149), Expect = 5e-08 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Frame = +3 Query: 54 MVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINLWHHRLGHPHLQVLKRVI 233 +VK LRTGA LL+GKT+D VY+ +S P + + V + S + WHHRLGHP +LK VI Sbjct: 324 LVKDLRTGATLLKGKTKDGVYEWLVSSPLLAFSSVKT--SSSEWHHRLGHPAFPILKHVI 381 Query: 234 ------XXXXXXXXXXCPDCLASKSH 293 C C +KSH Sbjct: 382 STNNLALSSSSLLHFSCNTCHCNKSH 407 >emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera] Length = 590 Score = 61.6 bits (148), Expect = 6e-08 Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 6/86 (6%) Frame = +3 Query: 54 MVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINLWHHRLGHPHLQVLKRVI 233 +VK RTG +LLQG E+ VY +P SP + VH S+ WH RLGHP +V+ R+I Sbjct: 388 LVKDRRTGEILLQGPCENGVYPMPSSPAATPIAFVHERTSVTGWHQRLGHPSFKVVTRLI 447 Query: 234 ------XXXXXXXXXXCPDCLASKSH 293 C C +K+H Sbjct: 448 SSFSLPTTSCLSGSNNCHSCSINKAH 473 >emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera] Length = 1112 Score = 58.9 bits (141), Expect = 4e-07 Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%) Frame = +3 Query: 57 VKSLRTGAVLLQGKTEDQVYKLPLS--PPFPSLNHVHSHPSINLWHHRLGHPHLQVLKRV 230 VK L TGA+LLQG+T+D VY+ PLS P + +++ WHHRLGHP L + K + Sbjct: 248 VKDLHTGAILLQGRTKDGVYEWPLSTTQSXPLIAFSSVKTTLSEWHHRLGHPSLSIFKNI 307 Query: 231 I 233 + Sbjct: 308 M 308 >gb|AAC02666.1| polyprotein [Arabidopsis thaliana] Length = 1451 Score = 57.0 bits (136), Expect = 2e-06 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 8/87 (9%) Frame = +3 Query: 57 VKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRLGHPHLQVLKRV 230 VK L TGA LLQGKT++++Y+ P++ + P +L WH RLGHP L +LK + Sbjct: 425 VKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKAL 484 Query: 231 I------XXXXXXXXXXCPDCLASKSH 293 I C DC +KSH Sbjct: 485 ISKFSLPISHSLQNQLLCSDCSINKSH 511