BLASTX nr result
ID: Glycyrrhiza23_contig00034087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00034087
(285 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containi... 171 7e-41
ref|XP_003623648.1| Pentatricopeptide repeat-containing protein ... 167 8e-40
ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containi... 149 3e-34
emb|CBI39640.3| unnamed protein product [Vitis vinifera] 149 3e-34
ref|XP_002319471.1| predicted protein [Populus trichocarpa] gi|2... 149 3e-34
>ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 171 bits (432), Expect = 7e-41
Identities = 81/94 (86%), Positives = 87/94 (92%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EAERLFW MP +NVVSWTVM+GGLL+E RV+DARKLFDMMP KDVVAVTNMIGGYC+ GR
Sbjct: 135 EAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGR 194
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRVDV 3
LDEAR LFD MPKRNVVTWTAMVSGYARNG+VDV
Sbjct: 195 LDEARALFDEMPKRNVVTWTAMVSGYARNGKVDV 228
Score = 92.0 bits (227), Expect = 4e-17
Identities = 45/93 (48%), Positives = 62/93 (66%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EA LF MPQRN VSW +I G +K + +AR++FD MP ++VV+ T+M+ GY + G
Sbjct: 73 EALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGD 132
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRVD 6
+ EA LF MP +NVV+WT M+ G + GRVD
Sbjct: 133 VAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVD 165
Score = 90.5 bits (223), Expect = 1e-16
Identities = 44/93 (47%), Positives = 60/93 (64%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EA LF MP+RNVV+WT M+ G + +V+ ARKLF++MP ++ V+ T M+ GY GR
Sbjct: 197 EARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGR 256
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRVD 6
+ EA LFD MP + VV M+ G+ NG VD
Sbjct: 257 MREASSLFDAMPVKPVVVCNEMIMGFGLNGEVD 289
Score = 85.1 bits (209), Expect = 5e-15
Identities = 42/89 (47%), Positives = 55/89 (61%)
Frame = -2
Query: 281 AERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRL 102
A +LF MP+RN VSWT M+ G R+ +A LFD MPVK VV MI G+ G +
Sbjct: 229 ARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEV 288
Query: 101 DEARELFDGMPKRNVVTWTAMVSGYARNG 15
D+AR +F GM +R+ TW+AM+ Y R G
Sbjct: 289 DKARRVFKGMKERDNGTWSAMIKVYERKG 317
Score = 80.5 bits (197), Expect = 1e-13
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = -2
Query: 260 MPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRLDEARELF 81
+P R V SW M+ + + +A LF+ MP ++ V+ +I G+ + G L EAR +F
Sbjct: 50 LPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVF 109
Query: 80 DGMPKRNVVTWTAMVSGYARNGRV 9
D MP RNVV+WT+MV GY RNG V
Sbjct: 110 DTMPDRNVVSWTSMVRGYVRNGDV 133
>ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 707
Score = 167 bits (423), Expect = 8e-40
Identities = 79/94 (84%), Positives = 86/94 (91%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EAE+LFW MP+RNVVSWTVMIGGLLKESR++DA+KLFDM+P KDVV VTNMIGGYCQVGR
Sbjct: 132 EAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGR 191
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRVDV 3
LDEARELFD M RNV TWT MVSGYA+NGRVDV
Sbjct: 192 LDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDV 225
Score = 97.8 bits (242), Expect = 8e-19
Identities = 47/93 (50%), Positives = 65/93 (69%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
+A LF MPQRN VS+ MI G +K V DARK+FD+MP ++VV+ T+M+ GY Q G
Sbjct: 70 DALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGM 129
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRVD 6
++EA +LF MP+RNVV+WT M+ G + R+D
Sbjct: 130 VEEAEKLFWEMPRRNVVSWTVMIGGLLKESRID 162
Score = 85.9 bits (211), Expect = 3e-15
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = -2
Query: 260 MPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRLDEARELF 81
+PQR + SW M+ + + DA LFD MP ++ V+ MI GY + G + +AR++F
Sbjct: 47 LPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVF 106
Query: 80 DGMPKRNVVTWTAMVSGYARNGRVD 6
D MP+RNVV+WT+MV GY + G V+
Sbjct: 107 DVMPERNVVSWTSMVRGYVQEGMVE 131
Score = 79.0 bits (193), Expect = 4e-13
Identities = 38/89 (42%), Positives = 56/89 (62%)
Frame = -2
Query: 281 AERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRL 102
A +LF MP+RN VSWT M+ G + R+++A +LF+ MPVK +VA MI + G +
Sbjct: 226 ARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEM 285
Query: 101 DEARELFDGMPKRNVVTWTAMVSGYARNG 15
AR +F+GM +R+ TW AM+ + R G
Sbjct: 286 HRARMMFEGMKERDEGTWNAMIKVFERKG 314
Score = 78.2 bits (191), Expect = 6e-13
Identities = 40/92 (43%), Positives = 56/92 (60%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EA LF M RNV +WT M+ G K RV+ ARKLF++MP ++ V+ T M+ GY Q GR
Sbjct: 194 EARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGR 253
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRV 9
+ EA ELF+ MP + +V M+ + G +
Sbjct: 254 MKEAFELFEAMPVKWIVACNEMILQFGLAGEM 285
>ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 149 bits (375), Expect = 3e-34
Identities = 67/94 (71%), Positives = 82/94 (87%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EAE LFW MP++NVVSWTVM+GGL++ R+++AR LFD+MPVKDVVA TNMI GYCQ GR
Sbjct: 127 EAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGR 186
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRVDV 3
L EARELFD MP+RNV++WT M+SGY +NG+VDV
Sbjct: 187 LAEARELFDEMPRRNVISWTTMISGYVQNGQVDV 220
Score = 99.0 bits (245), Expect = 4e-19
Identities = 48/92 (52%), Positives = 65/92 (70%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EA LF MP+RNV+SWT MI G ++ +V+ ARKLF++MP K+ V+ T M+ GY Q GR
Sbjct: 189 EARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGR 248
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRV 9
++EA ELFD MP + VV AM+ G+ +NG V
Sbjct: 249 IEEASELFDAMPVKAVVACNAMILGFGQNGEV 280
Score = 90.9 bits (224), Expect = 1e-16
Identities = 45/93 (48%), Positives = 60/93 (64%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EA LF MP+RN VSW +I G +K V +ARK FD MP ++VV+ T M+ GY Q G
Sbjct: 65 EARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGL 124
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRVD 6
+ EA LF MP++NVV+WT M+ G + R+D
Sbjct: 125 VSEAETLFWQMPEKNVVSWTVMLGGLIQVRRID 157
Score = 90.5 bits (223), Expect = 1e-16
Identities = 42/91 (46%), Positives = 59/91 (64%)
Frame = -2
Query: 281 AERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRL 102
A R+F MP + +VSW M+ G + +R +AR LFD MP ++ V+ +I GY + +
Sbjct: 35 ARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMV 94
Query: 101 DEARELFDGMPKRNVVTWTAMVSGYARNGRV 9
EAR+ FD MP+RNVV+WTAMV GY + G V
Sbjct: 95 SEARKAFDTMPERNVVSWTAMVRGYVQEGLV 125
Score = 84.3 bits (207), Expect = 9e-15
Identities = 41/89 (46%), Positives = 60/89 (67%)
Frame = -2
Query: 281 AERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRL 102
A +LF MP++N VSWT M+ G + R+E+A +LFD MPVK VVA MI G+ Q G +
Sbjct: 221 ARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEV 280
Query: 101 DEARELFDGMPKRNVVTWTAMVSGYARNG 15
+AR++FD + +++ TW+AM+ Y R G
Sbjct: 281 AKARQVFDQIREKDDGTWSAMIKVYERKG 309
Score = 70.5 bits (171), Expect = 1e-10
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = -2
Query: 242 VSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRLDEARELFDGMPKR 63
+++ I + ++E AR++FD MP K +V+ +M+ GY Q R EAR LFD MP+R
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER 76
Query: 62 NVVTWTAMVSGYARNGRV 9
N V+W ++SGY +N V
Sbjct: 77 NTVSWNGLISGYVKNRMV 94
>emb|CBI39640.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 149 bits (375), Expect = 3e-34
Identities = 67/94 (71%), Positives = 82/94 (87%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EAE LFW MP++NVVSWTVM+GGL++ R+++AR LFD+MPVKDVVA TNMI GYCQ GR
Sbjct: 127 EAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGR 186
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRVDV 3
L EARELFD MP+RNV++WT M+SGY +NG+VDV
Sbjct: 187 LAEARELFDEMPRRNVISWTTMISGYVQNGQVDV 220
Score = 99.0 bits (245), Expect = 4e-19
Identities = 48/92 (52%), Positives = 65/92 (70%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EA LF MP+RNV+SWT MI G ++ +V+ ARKLF++MP K+ V+ T M+ GY Q GR
Sbjct: 189 EARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGR 248
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRV 9
++EA ELFD MP + VV AM+ G+ +NG V
Sbjct: 249 IEEASELFDAMPVKAVVACNAMILGFGQNGEV 280
Score = 90.9 bits (224), Expect = 1e-16
Identities = 45/93 (48%), Positives = 60/93 (64%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EA LF MP+RN VSW +I G +K V +ARK FD MP ++VV+ T M+ GY Q G
Sbjct: 65 EARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGL 124
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRVD 6
+ EA LF MP++NVV+WT M+ G + R+D
Sbjct: 125 VSEAETLFWQMPEKNVVSWTVMLGGLIQVRRID 157
Score = 90.5 bits (223), Expect = 1e-16
Identities = 42/91 (46%), Positives = 59/91 (64%)
Frame = -2
Query: 281 AERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRL 102
A R+F MP + +VSW M+ G + +R +AR LFD MP ++ V+ +I GY + +
Sbjct: 35 ARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMV 94
Query: 101 DEARELFDGMPKRNVVTWTAMVSGYARNGRV 9
EAR+ FD MP+RNVV+WTAMV GY + G V
Sbjct: 95 SEARKAFDTMPERNVVSWTAMVRGYVQEGLV 125
Score = 84.3 bits (207), Expect = 9e-15
Identities = 41/89 (46%), Positives = 60/89 (67%)
Frame = -2
Query: 281 AERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRL 102
A +LF MP++N VSWT M+ G + R+E+A +LFD MPVK VVA MI G+ Q G +
Sbjct: 221 ARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEV 280
Query: 101 DEARELFDGMPKRNVVTWTAMVSGYARNG 15
+AR++FD + +++ TW+AM+ Y R G
Sbjct: 281 AKARQVFDQIREKDDGTWSAMIKVYERKG 309
Score = 70.5 bits (171), Expect = 1e-10
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = -2
Query: 242 VSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRLDEARELFDGMPKR 63
+++ I + ++E AR++FD MP K +V+ +M+ GY Q R EAR LFD MP+R
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER 76
Query: 62 NVVTWTAMVSGYARNGRV 9
N V+W ++SGY +N V
Sbjct: 77 NTVSWNGLISGYVKNRMV 94
>ref|XP_002319471.1| predicted protein [Populus trichocarpa] gi|222857847|gb|EEE95394.1|
predicted protein [Populus trichocarpa]
Length = 703
Score = 149 bits (375), Expect = 3e-34
Identities = 67/94 (71%), Positives = 82/94 (87%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EAE LFW MP++NVVSWTVM+GGL+++ RV++AR+LFDM+PVKDVVA TNMIGG C GR
Sbjct: 127 EAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGR 186
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRVDV 3
L EARE+FD MP+RNVV WT+M+SGYA N +VDV
Sbjct: 187 LSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDV 220
Score = 100 bits (250), Expect = 9e-20
Identities = 45/93 (48%), Positives = 66/93 (70%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EA++LF MP+RN +SW ++ G +K + +ARK+FD MP ++VV+ T+M+ GY Q G
Sbjct: 65 EAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGL 124
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRVD 6
+DEA LF MP++NVV+WT M+ G +GRVD
Sbjct: 125 IDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVD 157
Score = 89.0 bits (219), Expect = 4e-16
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = -2
Query: 284 EAERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGR 105
EA +F MPQRNVV+WT MI G ++V+ ARKLF++MP K+ V T M+ GY + GR
Sbjct: 189 EAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGR 248
Query: 104 LDEARELFDGMPKRNVVTWTAMVSGYARNGRV 9
++EA ELF MP + V M+ G+ NG V
Sbjct: 249 INEAAELFKAMPVKPVAACNGMIMGFGLNGEV 280
Score = 86.3 bits (212), Expect = 2e-15
Identities = 36/92 (39%), Positives = 58/92 (63%)
Frame = -2
Query: 281 AERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRL 102
A +F + + V SW ++ G R +A+KLFD MP ++ ++ ++ GY + G +
Sbjct: 35 ARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMI 94
Query: 101 DEARELFDGMPKRNVVTWTAMVSGYARNGRVD 6
EAR++FD MP+RNVV+WT+MV GY + G +D
Sbjct: 95 SEARKVFDKMPERNVVSWTSMVRGYVQEGLID 126
Score = 75.5 bits (184), Expect = 4e-12
Identities = 36/89 (40%), Positives = 54/89 (60%)
Frame = -2
Query: 281 AERLFWAMPQRNVVSWTVMIGGLLKESRVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRL 102
A +LF MP +N V+WT M+ G + R+ +A +LF MPVK V A MI G+ G +
Sbjct: 221 ARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEV 280
Query: 101 DEARELFDGMPKRNVVTWTAMVSGYARNG 15
+AR +FD M +++ TW+A++ Y R G
Sbjct: 281 GKARWVFDQMKEKDDGTWSALIKIYERKG 309
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = -2
Query: 200 RVEDARKLFDMMPVKDVVAVTNMIGGYCQVGRLDEARELFDGMPKRNVVTWTAMVSGYAR 21
+++ AR +FD + K V + ++ GY R EA++LFD MP+RN ++W +VSGY +
Sbjct: 31 QIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVK 90
Query: 20 NGRV 9
NG +
Sbjct: 91 NGMI 94