BLASTX nr result

ID: Glycyrrhiza23_contig00034077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034077
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545428.1| PREDICTED: F-box protein At2g32560-like [Gly...    79   4e-13
ref|XP_003519507.1| PREDICTED: F-box protein At2g32560-like [Gly...    75   4e-12
ref|XP_003529497.1| PREDICTED: F-box protein At2g32560-like [Gly...    70   2e-10
ref|XP_003556934.1| PREDICTED: F-box protein At2g32560-like [Gly...    69   3e-10

>ref|XP_003545428.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 397

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
 Frame = +1

Query: 49  WATEMRXXXXXXXXXXXXXSVKTISKLLRNRLWLGFLSQIPARMS-SRGAAENNNVXXXX 225
           WA+E+R             SVK+ISKL RNRLWLGFL QIP RMS  + +++  N+    
Sbjct: 27  WASELRLISPLFYKDL---SVKSISKLFRNRLWLGFLCQIPTRMSLMKKSSKVENIEDSQ 83

Query: 226 XXXXXXXXXXXXXXXCILERLPPSSLCRMAGVCRSLRE 339
                          CILE+LPP+SLC+MAGVCRSLRE
Sbjct: 84  DMSVLDLPELVLE--CILEKLPPASLCQMAGVCRSLRE 119


>ref|XP_003519507.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 397

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/97 (46%), Positives = 52/97 (53%)
 Frame = +1

Query: 49  WATEMRXXXXXXXXXXXXXSVKTISKLLRNRLWLGFLSQIPARMSSRGAAENNNVXXXXX 228
           WA+E+R             SVK+ISKL R RLWLGFL QIP RMS    +    +     
Sbjct: 27  WASEVRLISPLFYKDL---SVKSISKLFRKRLWLGFLGQIPTRMSLVNKSSKVEIIEDSQ 83

Query: 229 XXXXXXXXXXXXXXCILERLPPSSLCRMAGVCRSLRE 339
                         CILE+LPP SLC+MAGVCRSLRE
Sbjct: 84  DMSVLDLPELVLE-CILEKLPPPSLCQMAGVCRSLRE 119


>ref|XP_003529497.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 399

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/98 (44%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
 Frame = +1

Query: 49  WATEMRXXXXXXXXXXXXXSVKTISKLLRNRLWLGFLSQIPARMSS-RGAAENNNVXXXX 225
           WA+EM              SV+TISKL RN  W+GFL QIP  MS  R +  +       
Sbjct: 26  WASEM---WLFPLLFSQELSVRTISKLFRNCFWIGFLCQIPIGMSLVRKSLTSRVENVED 82

Query: 226 XXXXXXXXXXXXXXXCILERLPPSSLCRMAGVCRSLRE 339
                          CILERLPPS+LCRMA VCRSLRE
Sbjct: 83  SHDMSVLDLPELALDCILERLPPSALCRMAAVCRSLRE 120


>ref|XP_003556934.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 399

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 43/98 (43%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
 Frame = +1

Query: 49  WATEMRXXXXXXXXXXXXXSVKTISKLLRNRLWLGFLSQIPARMSS-RGAAENNNVXXXX 225
           WA+EM              S+ TISKL RNR W+GFL QIP  MS  R +  +       
Sbjct: 26  WASEM---WLFPLLFSQEFSMSTISKLFRNRFWIGFLCQIPIGMSLVRKSLTSRVENVEE 82

Query: 226 XXXXXXXXXXXXXXXCILERLPPSSLCRMAGVCRSLRE 339
                          CILERLPPSSLCR+A VCR+LRE
Sbjct: 83  SLDMSVLDLPELALDCILERLPPSSLCRIAAVCRTLRE 120


Top