BLASTX nr result

ID: Glycyrrhiza23_contig00034074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034074
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago trunca...   157   7e-37
emb|CAG27070.1| small GTPase [Medicago sativa]                        155   4e-36
emb|CAA98182.1| RAB11F [Lotus japonicus]                              153   2e-35
ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [...   152   3e-35
ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [...   152   4e-35

>ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
           gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A
           [Medicago truncatula]
          Length = 265

 Score =  157 bits (398), Expect = 7e-37
 Identities = 78/79 (98%), Positives = 78/79 (98%)
 Frame = -1

Query: 237 DVIFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLI 58
           D IFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLI
Sbjct: 4   DAIFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLI 63

Query: 57  KAQIWDTAGQERFRAITSS 1
           KAQIWDTAGQERFRAITSS
Sbjct: 64  KAQIWDTAGQERFRAITSS 82


>emb|CAG27070.1| small GTPase [Medicago sativa]
          Length = 218

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/78 (97%), Positives = 78/78 (100%)
 Frame = -1

Query: 234 VIFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIK 55
           +IF+EECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIK
Sbjct: 6   IIFEEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIK 65

Query: 54  AQIWDTAGQERFRAITSS 1
           AQIWDTAGQERFRAITSS
Sbjct: 66  AQIWDTAGQERFRAITSS 83


>emb|CAA98182.1| RAB11F [Lotus japonicus]
          Length = 218

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/81 (93%), Positives = 78/81 (96%)
 Frame = -1

Query: 243 MADVIFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDK 64
           MA   FDE+CDYLFKAVLIGDSGVGKSNL+SRFAKDEFRLDSKPTIGVEFAYRNIKVRDK
Sbjct: 1   MAADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDK 60

Query: 63  LIKAQIWDTAGQERFRAITSS 1
           LIKAQIWDTAGQERFRAITSS
Sbjct: 61  LIKAQIWDTAGQERFRAITSS 81


>ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
          Length = 218

 Score =  152 bits (384), Expect = 3e-35
 Identities = 78/81 (96%), Positives = 78/81 (96%)
 Frame = -1

Query: 243 MADVIFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDK 64
           MAD  FDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKV DK
Sbjct: 1   MADA-FDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDK 59

Query: 63  LIKAQIWDTAGQERFRAITSS 1
           LIKAQIWDTAGQERFRAITSS
Sbjct: 60  LIKAQIWDTAGQERFRAITSS 80


>ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
          Length = 218

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = -1

Query: 228 FDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ 49
           FDE+CDYLFKAVLIGDSGVGKSNL+SRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ
Sbjct: 7   FDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ 66

Query: 48  IWDTAGQERFRAITSS 1
           IWDTAGQERFRAITSS
Sbjct: 67  IWDTAGQERFRAITSS 82


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