BLASTX nr result

ID: Glycyrrhiza23_contig00034063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034063
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t...   208   3e-52
ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49
emb|CBI27273.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]   182   2e-44

>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 738

 Score =  208 bits (530), Expect = 3e-52
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = -1

Query: 321 FQPDDITFVGVLSACTQAGLVDLGHRYFRSMVQDYGICPKLQHYGCMIDLLARAGKFEEA 142
           F+PDDITFVGVLSACTQAGLVDLGH+YFRSM+QDYGI PKLQHYGCMIDLLARA KFEEA
Sbjct: 463 FRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEA 522

Query: 141 EILMKNMEMEPDGAIWGSLLSACRAHGRVELGEYVAERLFQLEPEN 4
           EILMKNMEMEPDGAIWGSLLSAC+AHGRVE GEYVAERLFQLEPEN
Sbjct: 523 EILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPEN 568


>ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  199 bits (505), Expect = 3e-49
 Identities = 92/110 (83%), Positives = 102/110 (92%)
 Frame = -1

Query: 333 LKEGFQPDDITFVGVLSACTQAGLVDLGHRYFRSMVQDYGICPKLQHYGCMIDLLARAGK 154
           + EGFQPDDITFVGVLSACTQAG V+LGHRYF SM +DYGI PKLQHYGCMIDLLAR+GK
Sbjct: 457 INEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGK 516

Query: 153 FEEAEILMKNMEMEPDGAIWGSLLSACRAHGRVELGEYVAERLFQLEPEN 4
           F+EA++LM NMEMEPDGAIWGSLL+ACR HG+VE GEYVAERLF+LEPEN
Sbjct: 517 FDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPEN 566


>emb|CBI27273.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  182 bits (463), Expect = 2e-44
 Identities = 85/109 (77%), Positives = 95/109 (87%)
 Frame = -1

Query: 327 EGFQPDDITFVGVLSACTQAGLVDLGHRYFRSMVQDYGICPKLQHYGCMIDLLARAGKFE 148
           EGF+PDDITFVGVLSAC+ AGLV+LG + F SMV+DY I PKLQHYGCMIDLL RAG F+
Sbjct: 159 EGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFD 218

Query: 147 EAEILMKNMEMEPDGAIWGSLLSACRAHGRVELGEYVAERLFQLEPENP 1
           EAE LMKNMEM+PDGAIWGSLL ACR HG VELGE+ A+ LF+LEPENP
Sbjct: 219 EAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENP 267


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  182 bits (463), Expect = 2e-44
 Identities = 85/109 (77%), Positives = 95/109 (87%)
 Frame = -1

Query: 327 EGFQPDDITFVGVLSACTQAGLVDLGHRYFRSMVQDYGICPKLQHYGCMIDLLARAGKFE 148
           EGF+PDDITFVGVLSAC+ AGLV+LG + F SMV+DY I PKLQHYGCMIDLL RAG F+
Sbjct: 461 EGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFD 520

Query: 147 EAEILMKNMEMEPDGAIWGSLLSACRAHGRVELGEYVAERLFQLEPENP 1
           EAE LMKNMEM+PDGAIWGSLL ACR HG VELGE+ A+ LF+LEPENP
Sbjct: 521 EAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENP 569


>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  182 bits (463), Expect = 2e-44
 Identities = 85/109 (77%), Positives = 95/109 (87%)
 Frame = -1

Query: 327 EGFQPDDITFVGVLSACTQAGLVDLGHRYFRSMVQDYGICPKLQHYGCMIDLLARAGKFE 148
           EGF+PDDITFVGVLSAC+ AGLV+LG + F SMV+DY I PKLQHYGCMIDLL RAG F+
Sbjct: 461 EGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFD 520

Query: 147 EAEILMKNMEMEPDGAIWGSLLSACRAHGRVELGEYVAERLFQLEPENP 1
           EAE LMKNMEM+PDGAIWGSLL ACR HG VELGE+ A+ LF+LEPENP
Sbjct: 521 EAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENP 569


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