BLASTX nr result

ID: Glycyrrhiza23_contig00034049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034049
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containi...   200   9e-50
ref|XP_003606718.1| Pentatricopeptide repeat-containing protein ...   194   8e-48
emb|CBI16093.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
ref|XP_002520533.1| pentatricopeptide repeat-containing protein,...   170   1e-40

>ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Glycine max]
          Length = 548

 Score =  200 bits (509), Expect = 9e-50
 Identities = 93/103 (90%), Positives = 97/103 (94%)
 Frame = -1

Query: 311 SIIFGYANHGYCEEAIELFNQMEMEGAAKLDHLTFTAALTACSHAGDIELGQRMFRIMQE 132
           SIIFG+ANHGYCEEAIELFNQME EG AKLDHLTFTAALTACSH GD ELGQR+F+IMQE
Sbjct: 372 SIIFGFANHGYCEEAIELFNQMEKEGVAKLDHLTFTAALTACSHVGDFELGQRLFKIMQE 431

Query: 131 KYCIEPRLEHYACMVDLLGRAGKLDEAYCMIKTMPVEPDLFVW 3
           KY IEPRLEHYACMVDLLGRAGKL EAYCMIKTMP+EPDLFVW
Sbjct: 432 KYSIEPRLEHYACMVDLLGRAGKLHEAYCMIKTMPIEPDLFVW 474


>ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355507773|gb|AES88915.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  194 bits (492), Expect = 8e-48
 Identities = 90/103 (87%), Positives = 97/103 (94%)
 Frame = -1

Query: 311 SIIFGYANHGYCEEAIELFNQMEMEGAAKLDHLTFTAALTACSHAGDIELGQRMFRIMQE 132
           S+IFGYANHG CEEAIELFNQMEMEG  KLDHLTFTAALTACSH GDIELGQR+F+IMQE
Sbjct: 374 SMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQE 433

Query: 131 KYCIEPRLEHYACMVDLLGRAGKLDEAYCMIKTMPVEPDLFVW 3
           KYCIEPRLEHYACMVDL GRAGKL+EAY +IK+MPV+PDLFVW
Sbjct: 434 KYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFVW 476


>emb|CBI16093.3| unnamed protein product [Vitis vinifera]
          Length = 702

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/103 (80%), Positives = 88/103 (85%)
 Frame = -1

Query: 311 SIIFGYANHGYCEEAIELFNQMEMEGAAKLDHLTFTAALTACSHAGDIELGQRMFRIMQE 132
           S+IFGYANHGYC EAIELFNQME E   KLDHLTFTA L ACSHAG +ELG+ +FR MQE
Sbjct: 527 SLIFGYANHGYCNEAIELFNQME-ESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQE 585

Query: 131 KYCIEPRLEHYACMVDLLGRAGKLDEAYCMIKTMPVEPDLFVW 3
           KY IEPRLEHYACMVDLLGRAGKL EAY +IK MPVEPD FVW
Sbjct: 586 KYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVW 628


>ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Vitis vinifera]
          Length = 545

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/103 (80%), Positives = 88/103 (85%)
 Frame = -1

Query: 311 SIIFGYANHGYCEEAIELFNQMEMEGAAKLDHLTFTAALTACSHAGDIELGQRMFRIMQE 132
           S+IFGYANHGYC EAIELFNQME E   KLDHLTFTA L ACSHAG +ELG+ +FR MQE
Sbjct: 370 SLIFGYANHGYCNEAIELFNQME-ESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQE 428

Query: 131 KYCIEPRLEHYACMVDLLGRAGKLDEAYCMIKTMPVEPDLFVW 3
           KY IEPRLEHYACMVDLLGRAGKL EAY +IK MPVEPD FVW
Sbjct: 429 KYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVW 471


>ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540375|gb|EEF41946.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 547

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/103 (77%), Positives = 88/103 (85%)
 Frame = -1

Query: 311 SIIFGYANHGYCEEAIELFNQMEMEGAAKLDHLTFTAALTACSHAGDIELGQRMFRIMQE 132
           S+IFGYANHGYC+EAIELFNQME   A K+DHL+FTA LTACSH   +ELGQ +F +M E
Sbjct: 372 SMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTACSHGRLVELGQSLFLLMHE 431

Query: 131 KYCIEPRLEHYACMVDLLGRAGKLDEAYCMIKTMPVEPDLFVW 3
           KY I PRLEHYACM+DLLGRAGKL EAY MIKTMPVEPDLFVW
Sbjct: 432 KYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFVW 474


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