BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034041
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45
ref|XP_003596787.1| Pentatricopeptide repeat-containing protein ...   117   1e-24
emb|CBI28351.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   102   3e-20

>ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  186 bits (471), Expect = 2e-45
 Identities = 89/125 (71%), Positives = 101/125 (80%)
 Frame = -3

Query: 377 STNPILRLVRYHCHCHTNPLLQSHAVVSLSPRTPLWDSDPHIAQHLFDQTPLRGLKEYNH 198
           STNPILR+ RY  HCH NPLLQSH VV+L+ RT L DSDP  AQ LFDQTPLR LK++N 
Sbjct: 14  STNPILRIRRYQLHCHANPLLQSH-VVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQ 72

Query: 197 LLFRYSRNDQPKEALHLFVSLHRSSLPPDEFTLSCVLKVCTGSFDGIMGRQVHCQCFKCG 18
           LLFRYSR DQ +EALHLFVSL+RS L PD +T+SCVL VC GSF+G +G QVHCQC KCG
Sbjct: 73  LLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCG 132

Query: 17  LVQHV 3
           LV H+
Sbjct: 133 LVHHL 137


>ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355485835|gb|AES67038.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/88 (67%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
 Frame = -3

Query: 260 PHIAQHLFDQTPLRG--LKEYNHLLFRYSRNDQPKEALHLFVSLHRSSLPPDEFTLSCVL 87
           PHIA +LFD+ P R   LKE+N LLF YSR+ Q KEAL+LFVSL  SSL PDE TLSCV 
Sbjct: 41  PHIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVF 100

Query: 86  KVCTGSFDGIMGRQVHCQCFKCGLVQHV 3
            +C GS DG +GRQVHCQC K GLV HV
Sbjct: 101 NICAGSLDGKLGRQVHCQCVKFGLVDHV 128


>emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/102 (55%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
 Frame = -3

Query: 299 VSLSPRTPLWDSDPHIAQH---LFDQTPLRGLKEYNHLLFRYSRNDQPKEALHLFVSLHR 129
           V  +P+T L  S      H   LFD+TP +GL   NHLLF +SRNDQ KEAL+LF+ L R
Sbjct: 26  VVFNPKTSLSSSKLSTLSHSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRR 85

Query: 128 SSLPPDEFTLSCVLKVCTGSFDGIMGRQVHCQCFKCGLVQHV 3
           S  P D  +LSCVLKVC   FD I+G+QVHCQC KCG V+ V
Sbjct: 86  SGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDV 127


>ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/102 (55%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
 Frame = -3

Query: 299 VSLSPRTPLWDSDPHIAQH---LFDQTPLRGLKEYNHLLFRYSRNDQPKEALHLFVSLHR 129
           V  +P+T L  S      H   LFD+TP +GL   NHLLF +SRNDQ KEAL+LF+ L R
Sbjct: 26  VVFNPKTSLSSSKLSTLSHSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRR 85

Query: 128 SSLPPDEFTLSCVLKVCTGSFDGIMGRQVHCQCFKCGLVQHV 3
           S  P D  +LSCVLKVC   FD I+G+QVHCQC KCG V+ V
Sbjct: 86  SGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDV 127


>ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/117 (46%), Positives = 68/117 (58%)
 Frame = -3

Query: 353 VRYHCHCHTNPLLQSHAVVSLSPRTPLWDSDPHIAQHLFDQTPLRGLKEYNHLLFRYSRN 174
           +++  H H     QS   +SL  R       P  A  LFD+TPL+ +  YN LLF +SRN
Sbjct: 30  IKHFLHPHGFLYHQSLPFISLPSR-------PRYAHQLFDETPLKDISHYNRLLFDFSRN 82

Query: 173 DQPKEALHLFVSLHRSSLPPDEFTLSCVLKVCTGSFDGIMGRQVHCQCFKCGLVQHV 3
           +  +EALHLF  LH S L  D  TLSC LKVC   FD ++GRQVHCQ  K G ++ V
Sbjct: 83  NHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDV 139