BLASTX nr result

ID: Glycyrrhiza23_contig00034032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034032
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592540.1| Pentatricopeptide repeat-containing protein ...   149   3e-34
ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   133   1e-29
ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29

>ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481588|gb|AES62791.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 507

 Score =  149 bits (375), Expect = 3e-34
 Identities = 74/89 (83%), Positives = 84/89 (94%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   LIEALGKIRQFKMIWNLVDDMKRRKLLNCDTFALIARRYARARKVKEAVETFEKMEKYGL 182
           LIEALGKIRQFKMIWNLVD+MK+RKLLN DTF+LIARRY RA+ +KEA++TFE+MEKYGL
Sbjct: 126 LIEALGKIRQFKMIWNLVDEMKQRKLLNGDTFSLIARRYVRAKVIKEALKTFERMEKYGL 185

Query: 183 KPQVSDFNRLIDVLCKSKC-VEKAQELFD 266
           KPQ+SDFN+LIDVLCKSK  VEKAQELFD
Sbjct: 186 KPQISDFNKLIDVLCKSKFHVEKAQELFD 214


>ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Glycine max]
          Length = 507

 Score =  146 bits (369), Expect = 2e-33
 Identities = 70/88 (79%), Positives = 80/88 (90%)
 Frame = +3

Query: 3   LIEALGKIRQFKMIWNLVDDMKRRKLLNCDTFALIARRYARARKVKEAVETFEKMEKYGL 182
           LIEALGKIRQFKMIW LV+DMK+RKLL  DTF+L+ARRYARARK KEA++TFEKME YGL
Sbjct: 126 LIEALGKIRQFKMIWTLVNDMKQRKLLTSDTFSLVARRYARARKAKEAIKTFEKMEHYGL 185

Query: 183 KPQVSDFNRLIDVLCKSKCVEKAQELFD 266
           KP VSDFN+L+DVLCKSK VE+A E+FD
Sbjct: 186 KPHVSDFNKLVDVLCKSKSVEEAHEVFD 213


>ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial [Vitis vinifera]
          Length = 531

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/88 (77%), Positives = 81/88 (92%)
 Frame = +3

Query: 3   LIEALGKIRQFKMIWNLVDDMKRRKLLNCDTFALIARRYARARKVKEAVETFEKMEKYGL 182
           LIEALGKI+QFKMIWNLV+DM+ + LL  +TFALI+RRYARARKVKEAVETFEKMEK+GL
Sbjct: 151 LIEALGKIKQFKMIWNLVNDMRSKGLLTQETFALISRRYARARKVKEAVETFEKMEKFGL 210

Query: 183 KPQVSDFNRLIDVLCKSKCVEKAQELFD 266
           +P +SDFNRL+D LCKS+ VE+AQE+FD
Sbjct: 211 QPVLSDFNRLLDALCKSRHVERAQEVFD 238


>ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/88 (73%), Positives = 78/88 (88%)
 Frame = +3

Query: 3   LIEALGKIRQFKMIWNLVDDMKRRKLLNCDTFALIARRYARARKVKEAVETFEKMEKYGL 182
           LIEALGKI+QF +IWNLV DMKR+ +L+ +TFALI RRYARARKVKEAVE+FEKMEK+G 
Sbjct: 162 LIEALGKIKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGF 221

Query: 183 KPQVSDFNRLIDVLCKSKCVEKAQELFD 266
           +  VSDFNRL+D LCKS+ V+KAQE+FD
Sbjct: 222 QMGVSDFNRLLDTLCKSRNVKKAQEVFD 249


>ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/88 (73%), Positives = 78/88 (88%)
 Frame = +3

Query: 3   LIEALGKIRQFKMIWNLVDDMKRRKLLNCDTFALIARRYARARKVKEAVETFEKMEKYGL 182
           LIEALGKI+QF +IWNLV DMKR+ +L+ +TFALI RRYARARKVKEAVE+FEKMEK+G 
Sbjct: 162 LIEALGKIKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGF 221

Query: 183 KPQVSDFNRLIDVLCKSKCVEKAQELFD 266
           +  VSDFNRL+D LCKS+ V+KAQE+FD
Sbjct: 222 QMGVSDFNRLLDTLCKSRNVKKAQEVFD 249


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