BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034019
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia...    86   2e-21
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...    84   2e-19
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    84   9e-19
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]    86   3e-18
gb|ABE88096.1| Integrase, catalytic region [Medicago truncatula]       82   7e-18

>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268497|emb|CAB78748.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1433

 Score = 86.3 bits (212), Expect(2) = 2e-21
 Identities = 39/69 (56%), Positives = 47/69 (68%)
 Frame = -3

Query: 278 PTYLDLKVFGCLTYASTLTNNRSELDPRFRRCIFLGFKPGVKGYILYDLHTRAISISRNV 99
           P Y  LK FGCL Y+ST    R + +PR R C+FLG+  G KGY L D+ T A+SISR+V
Sbjct: 759 PAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHV 818

Query: 98  IFHESCFPF 72
           IFHE  FPF
Sbjct: 819 IFHEDIFPF 827



 Score = 41.2 bits (95), Expect(2) = 2e-21
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = -1

Query: 343 INRLPTHVLNNKSPYEVLHNIP 278
           INRLPT VLNNKSPYE L NIP
Sbjct: 737 INRLPTPVLNNKSPYEKLKNIP 758


>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score = 84.3 bits (207), Expect(2) = 2e-19
 Identities = 39/70 (55%), Positives = 50/70 (71%)
 Frame = -3

Query: 278  PTYLDLKVFGCLTYASTLTNNRSELDPRFRRCIFLGFKPGVKGYILYDLHTRAISISRNV 99
            P+   L+VFGCL Y+STL N+R++  PR R+ IFLG++ G KGY+LYD       +SRNV
Sbjct: 1000 PSLHHLRVFGCLVYSSTLHNHRTKFAPRARKSIFLGYREGTKGYLLYDPIIHEFYVSRNV 1059

Query: 98   IFHESCFPFA 69
            IFHE  FPFA
Sbjct: 1060 IFHEIVFPFA 1069



 Score = 35.8 bits (81), Expect(2) = 2e-19
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 343  INRLPTHVLNNKSPYEVLHNIP 278
            INRLPT +LNN +PY++LH+ P
Sbjct: 978  INRLPTPLLNNLTPYQMLHSTP 999


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 83.6 bits (205), Expect(2) = 9e-19
 Identities = 42/88 (47%), Positives = 52/88 (59%)
 Frame = -3

Query: 278  PTYLDLKVFGCLTYASTLTNNRSELDPRFRRCIFLGFKPGVKGYILYDLHTRAISISRNV 99
            P Y  LKVFGCL Y ST    R +  PR R C+FLG+  G KGY L DL T  I ISR+V
Sbjct: 801  PDYTSLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTIHISRHV 860

Query: 98   IFHESCFPFAHFVSQQALPPDNIDSDNP 15
            +F+E+ FP   F  +  +P D  D  +P
Sbjct: 861  VFYETVFP---FTDKTIIPRDVFDLVDP 885



 Score = 34.7 bits (78), Expect(2) = 9e-19
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = -1

Query: 343 INRLPTHVLNNKSPYEVLH 287
           INRLPT +L+NKSP+E+LH
Sbjct: 779 INRLPTPLLSNKSPFELLH 797


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score = 86.3 bits (212), Expect(2) = 3e-18
 Identities = 38/68 (55%), Positives = 47/68 (69%)
 Frame = -3

Query: 278 PTYLDLKVFGCLTYASTLTNNRSELDPRFRRCIFLGFKPGVKGYILYDLHTRAISISRNV 99
           P Y   K FGCL +AST+TNNR +  PR  +CIFLG+ P +KGY + DL T    +SRNV
Sbjct: 722 PNYNYFKXFGCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKVLDLTTXKXFVSRNV 781

Query: 98  IFHESCFP 75
           +FHES FP
Sbjct: 782 JFHESTFP 789



 Score = 30.0 bits (66), Expect(2) = 3e-18
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -1

Query: 343 INRLPTHVLNNKSPYEVLHNIP 278
           INR P+ +LNN++PY++L   P
Sbjct: 700 INRTPSSILNNQTPYQLLFQKP 721


>gb|ABE88096.1| Integrase, catalytic region [Medicago truncatula]
          Length = 604

 Score = 82.0 bits (201), Expect(2) = 7e-18
 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
 Frame = -3

Query: 278 PTYLDLKVFGCLTYASTLTNNRSELDPRFRRCIFLGFKPGVKGYILYDLHTRAISISRNV 99
           P     KVFGCL YASTL ++R++L  R R+ +FLG+K G KG  LYDL+T+ I +SRNV
Sbjct: 474 PDINSFKVFGCLCYASTLQSHRTKLQSRARKSVFLGYKSGYKGSFLYDLNTKEIFMSRNV 533

Query: 98  IFHESCFPF----AHFVS 57
            FHES  P+     HF S
Sbjct: 534 TFHESILPYNSTNTHFSS 551



 Score = 33.1 bits (74), Expect(2) = 7e-18
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = -1

Query: 343 INRLPTHVLNNKSPYEVLH 287
           INR+PT VL NKSPY+VL+
Sbjct: 452 INRVPTLVLENKSPYQVLY 470