BLASTX nr result

ID: Glycyrrhiza23_contig00034009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034009
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606031.1| ATP synthase subunit a chloroplastic, partia...   238   5e-61
ref|NP_084799.1| ribosomal protein S2 [Lotus japonicus] gi|25009...   237   8e-61
ref|YP_003587775.1| ribosomal protein S2 [Lathyrus sativus] gi|2...   236   1e-60
ref|XP_003605593.1| 30S ribosomal protein S2 [Medicago truncatul...   235   2e-60
ref|YP_002149736.1| ribosomal protein S2 [Cicer arietinum] gi|19...   235   3e-60

>ref|XP_003606031.1| ATP synthase subunit a chloroplastic, partial [Medicago truncatula]
           gi|355507086|gb|AES88228.1| ATP synthase subunit a
           chloroplastic, partial [Medicago truncatula]
          Length = 642

 Score =  238 bits (606), Expect = 5e-61
 Identities = 112/122 (91%), Positives = 119/122 (97%)
 Frame = -3

Query: 367 ALRARCHYVNKKWLGGMLTNWHTTETRLRKFRDLRTEQRTGKLNSLPKRDAAMLKRQLSH 188
           A+RARCHYVNKKWLGGMLTNW+TTETRLRKFRDLRTEQ+TGKLNSLPKRDAAM KRQLSH
Sbjct: 88  AIRARCHYVNKKWLGGMLTNWYTTETRLRKFRDLRTEQKTGKLNSLPKRDAAMFKRQLSH 147

Query: 187 LETYLGGIKYMSRLPDIVIIVDQQEEYKALRECMTLGIPTICLIDTNCDPDLADISIPAN 8
           LETYLGGIKYM+ LPDIVII+DQQEEY AL+EC+TLGIPTICLIDTNCDPDLADISIPAN
Sbjct: 148 LETYLGGIKYMTGLPDIVIILDQQEEYTALQECITLGIPTICLIDTNCDPDLADISIPAN 207

Query: 7   DD 2
           DD
Sbjct: 208 DD 209


>ref|NP_084799.1| ribosomal protein S2 [Lotus japonicus]
           gi|25009142|sp|Q9BBS6.1|RR2_LOTJA RecName: Full=30S
           ribosomal protein S2, chloroplastic
           gi|13358980|dbj|BAB33197.1| ribosomal protein S2 [Lotus
           japonicus]
          Length = 236

 Score =  237 bits (604), Expect = 8e-61
 Identities = 112/122 (91%), Positives = 119/122 (97%)
 Frame = -3

Query: 367 ALRARCHYVNKKWLGGMLTNWHTTETRLRKFRDLRTEQRTGKLNSLPKRDAAMLKRQLSH 188
           A+RARCHYVNKKWLGGMLTNW+TTETRLRKFR+LRTEQ+TGKLN LPKRDAA+LKRQLSH
Sbjct: 88  AIRARCHYVNKKWLGGMLTNWYTTETRLRKFRELRTEQKTGKLNCLPKRDAAILKRQLSH 147

Query: 187 LETYLGGIKYMSRLPDIVIIVDQQEEYKALRECMTLGIPTICLIDTNCDPDLADISIPAN 8
           LETYLGGIKYM+ LPDIVIIVDQQEEY ALREC+TLGIPTICLIDTNCDPDLADISIPAN
Sbjct: 148 LETYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDTNCDPDLADISIPAN 207

Query: 7   DD 2
           DD
Sbjct: 208 DD 209


>ref|YP_003587775.1| ribosomal protein S2 [Lathyrus sativus] gi|293338664|gb|ADE43636.1|
           ribosomal protein S2 (chloroplast) [Lathyrus sativus]
          Length = 231

 Score =  236 bits (603), Expect = 1e-60
 Identities = 110/122 (90%), Positives = 120/122 (98%)
 Frame = -3

Query: 367 ALRARCHYVNKKWLGGMLTNWHTTETRLRKFRDLRTEQRTGKLNSLPKRDAAMLKRQLSH 188
           A+RARCHYVNKKWLGGMLTNW+TTETRLRKFRDLRTEQ+TGKLNSLPKRDAAMLKRQLSH
Sbjct: 88  AIRARCHYVNKKWLGGMLTNWYTTETRLRKFRDLRTEQKTGKLNSLPKRDAAMLKRQLSH 147

Query: 187 LETYLGGIKYMSRLPDIVIIVDQQEEYKALRECMTLGIPTICLIDTNCDPDLADISIPAN 8
           LETYLGGIKYM+ LPDIVII+DQ+EEYKAL+EC+TLGIPTIC+IDTNCDPDLAD+ IPAN
Sbjct: 148 LETYLGGIKYMTGLPDIVIILDQEEEYKALQECITLGIPTICVIDTNCDPDLADLPIPAN 207

Query: 7   DD 2
           DD
Sbjct: 208 DD 209


>ref|XP_003605593.1| 30S ribosomal protein S2 [Medicago truncatula]
           gi|355506648|gb|AES87790.1| 30S ribosomal protein S2
           [Medicago truncatula]
          Length = 221

 Score =  235 bits (600), Expect = 2e-60
 Identities = 111/122 (90%), Positives = 118/122 (96%)
 Frame = -3

Query: 367 ALRARCHYVNKKWLGGMLTNWHTTETRLRKFRDLRTEQRTGKLNSLPKRDAAMLKRQLSH 188
           A+RARCHYVNKKWLGGMLTNW+TTETRLRKFRDLRTEQ+TGKLNSLPKRDAAM KRQLSH
Sbjct: 73  AIRARCHYVNKKWLGGMLTNWYTTETRLRKFRDLRTEQKTGKLNSLPKRDAAMFKRQLSH 132

Query: 187 LETYLGGIKYMSRLPDIVIIVDQQEEYKALRECMTLGIPTICLIDTNCDPDLADISIPAN 8
           LETYLGGIKYM+ LPDIVII+DQQEEY AL+EC+TLGIPTICLIDTNCDPDLADI IPAN
Sbjct: 133 LETYLGGIKYMTGLPDIVIILDQQEEYTALQECITLGIPTICLIDTNCDPDLADILIPAN 192

Query: 7   DD 2
           DD
Sbjct: 193 DD 194


>ref|YP_002149736.1| ribosomal protein S2 [Cicer arietinum] gi|197089803|gb|ACH41073.1|
           ribosomal protein S2 [Cicer arietinum]
          Length = 236

 Score =  235 bits (599), Expect = 3e-60
 Identities = 112/122 (91%), Positives = 118/122 (96%)
 Frame = -3

Query: 367 ALRARCHYVNKKWLGGMLTNWHTTETRLRKFRDLRTEQRTGKLNSLPKRDAAMLKRQLSH 188
           A+RARCHYVNKKWLGGMLTNW+TTETRLRKFRDLRTEQ+TGK NSLPKRDAAMLKRQLSH
Sbjct: 88  AIRARCHYVNKKWLGGMLTNWYTTETRLRKFRDLRTEQKTGKPNSLPKRDAAMLKRQLSH 147

Query: 187 LETYLGGIKYMSRLPDIVIIVDQQEEYKALRECMTLGIPTICLIDTNCDPDLADISIPAN 8
           LETYLGGIKYM+RLPDIVIIVDQQE+Y ALREC+TLGIPTICLIDTN DPDLADI IPAN
Sbjct: 148 LETYLGGIKYMTRLPDIVIIVDQQEDYTALRECITLGIPTICLIDTNSDPDLADIPIPAN 207

Query: 7   DD 2
           DD
Sbjct: 208 DD 209


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