BLASTX nr result

ID: Glycyrrhiza23_contig00033982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033982
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636511.1| hypothetical protein MTR_043s0014 [Medicago ...    68   7e-10
gb|ABO80474.1| Polynucleotidyl transferase, Ribonuclease H fold ...    59   4e-07
gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold ...    58   9e-07
gb|ABN06159.1| Polynucleotidyl transferase, Ribonuclease H fold ...    58   9e-07
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    57   2e-06

>ref|XP_003636511.1| hypothetical protein MTR_043s0014 [Medicago truncatula]
           gi|355502446|gb|AES83649.1| hypothetical protein
           MTR_043s0014 [Medicago truncatula]
          Length = 132

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
 Frame = +1

Query: 22  TPWNRFWPV-LEGEALGILEPLRWASSLDITQAVTETGCRGVVDQIGQKQPCSSESGIII 198
           T W  ++P  LE EALG+ + + W   L ++    E  C+ VVD I +     S+ G II
Sbjct: 15  TKWFDYYPTPLEAEALGLKDTIVWLGELGLSMVQIELDCKLVVDSIMENSNNQSDFGNII 74

Query: 199 NAIQCFLAVHINFTISFAHRQVNSVAHVLATRALSLDT-HKDYFYVP 336
           ++ +  L    NF ISF  RQ N VAH L TRAL LD  H  Y  +P
Sbjct: 75  SSCRSLLNQFRNFKISFVRRQANYVAHTL-TRALKLDACHHIYDLIP 120


>gb|ABO80474.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 118

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/97 (35%), Positives = 52/97 (53%)
 Frame = +1

Query: 46  VLEGEALGILEPLRWASSLDITQAVTETGCRGVVDQIGQKQPCSSESGIIINAIQCFLAV 225
           VLEGEA+ +LE L +  +    + V E+    +V  +  +    SE   I+++I   LA+
Sbjct: 10  VLEGEAVALLEALHFVDANRWDRVVFESDSSTLVQALSSQDHGDSEFYAIVSSIIYQLAL 69

Query: 226 HINFTISFAHRQVNSVAHVLATRALSLDTHKDYFYVP 336
           H NF + F  RQ N VAH LA  A S  +H+ ++  P
Sbjct: 70  HSNFNVKFIWRQANMVAHTLARAACSWASHRIFYSYP 106


>gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 260

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/95 (33%), Positives = 52/95 (54%)
 Frame = +1

Query: 52  EGEALGILEPLRWASSLDITQAVTETGCRGVVDQIGQKQPCSSESGIIINAIQCFLAVHI 231
           E EA G+LE ++ A +  +   + ++ C+ VVD +       +E G II   +  L++H 
Sbjct: 154 EAEATGLLEAVKLAIARGMQSVIFKSDCKIVVDAVNSSVNPHNELGDIIFYCKQLLSLHA 213

Query: 232 NFTISFAHRQVNSVAHVLATRALSLDTHKDYFYVP 336
           NF++ F  RQ N VAH +A  +LS  +   +F VP
Sbjct: 214 NFSVRFVRRQANKVAHNIARASLSHPSPHIFFDVP 248


>gb|ABN06159.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 266

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
 Frame = +1

Query: 19  ETPWNRF-WPVLEGEALGILEPLRWASSLDITQAVTETGCRGVVDQIGQKQPCSSESGII 195
           +T W R    VLEGEA+ +LE +  A +    + V E+    +V  +       SE   I
Sbjct: 148 QTKWQRANMTVLEGEAVALLEAIHSADANRWNRVVFESDSSTLVQALSSPGHGDSEFSAI 207

Query: 196 INAIQCFLAVHINFTISFAHRQVNSVAHVLATRALSLDTHKDYFYVP 336
           +++I   L++H NF + F  RQ N VAH LA    S  +H+ ++  P
Sbjct: 208 VSSIIYQLSLHSNFEVKFVRRQANMVAHTLARADCSWASHRIFYSYP 254


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/82 (37%), Positives = 42/82 (51%)
 Frame = +1

Query: 43  PVLEGEALGILEPLRWASSLDITQAVTETGCRGVVDQIGQKQPCSSESGIIINAIQCFLA 222
           P  E EA+G+ + + W   L+++    E  C+ VVD I  K    +E G II+  +  L 
Sbjct: 106 PPQEAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQ 165

Query: 223 VHINFTISFAHRQVNSVAHVLA 288
              NF ISF  RQ N VAH  A
Sbjct: 166 QFTNFKISFVRRQANVVAHSFA 187


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