BLASTX nr result

ID: Glycyrrhiza23_contig00033942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033942
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626373.1| WD repeat-containing protein-like protein [M...   187   6e-46
ref|XP_002512270.1| nucleotide binding protein, putative [Ricinu...   185   3e-45
ref|XP_003554684.1| PREDICTED: WD repeat-containing protein 48-l...   183   1e-44
ref|XP_003521739.1| PREDICTED: WD repeat-containing protein 48-l...   181   7e-44
ref|XP_002319610.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44

>ref|XP_003626373.1| WD repeat-containing protein-like protein [Medicago truncatula]
           gi|355501388|gb|AES82591.1| WD repeat-containing
           protein-like protein [Medicago truncatula]
          Length = 783

 Score =  187 bits (476), Expect = 6e-46
 Identities = 88/105 (83%), Positives = 97/105 (92%)
 Frame = -1

Query: 315 TAMHRVGSAGNTNNSTRPRKEKRLTYVLNDSDYSKHCAGINCLAVLKSAVSDGSDFLFTG 136
           +AMHRV S GN NNSTRPRKEKRLTYVLNDSD +KHCAGINCLA+L S +SDGSD+LFTG
Sbjct: 4   SAMHRVASTGNANNSTRPRKEKRLTYVLNDSDDTKHCAGINCLALLTSTISDGSDYLFTG 63

Query: 135 SRDGKLKRWALAEDAATCCATFESHMDWVNGALLVGDSTLVSCSS 1
           SRDG+LKRWALAEDAATC ATFESH+DWVN A+LVGD+TLVSCSS
Sbjct: 64  SRDGRLKRWALAEDAATCSATFESHVDWVNDAVLVGDNTLVSCSS 108


>ref|XP_002512270.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223548231|gb|EEF49722.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 764

 Score =  185 bits (470), Expect = 3e-45
 Identities = 86/103 (83%), Positives = 97/103 (94%)
 Frame = -1

Query: 309 MHRVGSAGNTNNSTRPRKEKRLTYVLNDSDYSKHCAGINCLAVLKSAVSDGSDFLFTGSR 130
           MHRVGSAGNT++S RPRKEKRLTYVLND+D  KHC+G+NCLAVLKS+VSDGSD+LFTGSR
Sbjct: 1   MHRVGSAGNTSSSVRPRKEKRLTYVLNDADDKKHCSGVNCLAVLKSSVSDGSDYLFTGSR 60

Query: 129 DGKLKRWALAEDAATCCATFESHMDWVNGALLVGDSTLVSCSS 1
           DG LKRWALAED+ATC ATFESH+DWVN A+LVGDSTL+SCSS
Sbjct: 61  DGTLKRWALAEDSATCSATFESHVDWVNDAVLVGDSTLISCSS 103


>ref|XP_003554684.1| PREDICTED: WD repeat-containing protein 48-like [Glycine max]
          Length = 763

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/103 (85%), Positives = 93/103 (90%)
 Frame = -1

Query: 309 MHRVGSAGNTNNSTRPRKEKRLTYVLNDSDYSKHCAGINCLAVLKSAVSDGSDFLFTGSR 130
           MHRVGSA N NNSTRPRKEKRLTYVLNDSD SKHCAGINCLA+L SA SDGSD+LFTGSR
Sbjct: 1   MHRVGSASNGNNSTRPRKEKRLTYVLNDSDDSKHCAGINCLALLMSAASDGSDYLFTGSR 60

Query: 129 DGKLKRWALAEDAATCCATFESHMDWVNGALLVGDSTLVSCSS 1
           DG+LKRWAL  D ATC ATFESH+DWVN A+LVGDSTLVSCSS
Sbjct: 61  DGRLKRWALGVDRATCLATFESHVDWVNDAVLVGDSTLVSCSS 103


>ref|XP_003521739.1| PREDICTED: WD repeat-containing protein 48-like [Glycine max]
          Length = 764

 Score =  181 bits (458), Expect = 7e-44
 Identities = 87/103 (84%), Positives = 92/103 (89%)
 Frame = -1

Query: 309 MHRVGSAGNTNNSTRPRKEKRLTYVLNDSDYSKHCAGINCLAVLKSAVSDGSDFLFTGSR 130
           MHRVGSA N NNSTRPRKEKRLTYVLNDSD  KHCAGINCLA+L SA SDGSD+LFTGSR
Sbjct: 1   MHRVGSASNGNNSTRPRKEKRLTYVLNDSDDIKHCAGINCLALLTSAASDGSDYLFTGSR 60

Query: 129 DGKLKRWALAEDAATCCATFESHMDWVNGALLVGDSTLVSCSS 1
           DG+LKRWAL  D ATC ATFESH+DWVN A+LVGDSTLVSCSS
Sbjct: 61  DGRLKRWALGVDRATCLATFESHVDWVNDAVLVGDSTLVSCSS 103


>ref|XP_002319610.1| predicted protein [Populus trichocarpa] gi|222857986|gb|EEE95533.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/103 (82%), Positives = 93/103 (90%)
 Frame = -1

Query: 309 MHRVGSAGNTNNSTRPRKEKRLTYVLNDSDYSKHCAGINCLAVLKSAVSDGSDFLFTGSR 130
           MHRVGSAGNTNNS RPRKEKRLTYVL+D+D +KHCAGINCL VLKS VSDG D+LFTGSR
Sbjct: 1   MHRVGSAGNTNNSVRPRKEKRLTYVLSDADDTKHCAGINCLKVLKSTVSDGRDYLFTGSR 60

Query: 129 DGKLKRWALAEDAATCCATFESHMDWVNGALLVGDSTLVSCSS 1
           DG LKRWAL+ED+ATC ATFESH+DWVN A+L GD TLVSCSS
Sbjct: 61  DGTLKRWALSEDSATCSATFESHVDWVNDAVLAGDRTLVSCSS 103


Top