BLASTX nr result

ID: Glycyrrhiza23_contig00033906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033906
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517446.1| PREDICTED: YTH domain-containing protein 1-l...   203   1e-50
ref|XP_003538717.1| PREDICTED: YTH domain-containing protein 1-l...   202   3e-50
ref|XP_002275532.2| PREDICTED: uncharacterized protein LOC100254...   185   4e-45
emb|CBI34780.3| unnamed protein product [Vitis vinifera]              185   4e-45
ref|XP_002298082.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44

>ref|XP_003517446.1| PREDICTED: YTH domain-containing protein 1-like [Glycine max]
          Length = 396

 Score =  203 bits (516), Expect = 1e-50
 Identities = 95/102 (93%), Positives = 99/102 (97%)
 Frame = +1

Query: 49  NSGSVILIFSVNMSGSFQGYAQMMSSIGYRRDNVWSDRSGKSNPWGRSFKVKWLCLNDLP 228
           NSGSVILIFSVNMSGSFQGYAQMMSSIG  RDNVWS+ +GKSNPWGRSFKVKW+CLNDLP
Sbjct: 108 NSGSVILIFSVNMSGSFQGYAQMMSSIGRGRDNVWSEGTGKSNPWGRSFKVKWMCLNDLP 167

Query: 229 FHKTLHLKNPLNEYKPVKISRDCQELSPDIGLALCELLDGKN 354
           FHKTLHLKNPLN+YKPVKISRDCQELSPDIGLALCELLDGKN
Sbjct: 168 FHKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCELLDGKN 209


>ref|XP_003538717.1| PREDICTED: YTH domain-containing protein 1-like [Glycine max]
          Length = 368

 Score =  202 bits (513), Expect = 3e-50
 Identities = 94/103 (91%), Positives = 99/103 (96%)
 Frame = +1

Query: 49  NSGSVILIFSVNMSGSFQGYAQMMSSIGYRRDNVWSDRSGKSNPWGRSFKVKWLCLNDLP 228
           NSGSVILIFSVNMSGSFQGYAQMM+SIG  RDN WS+ +GKSNPWGRSFKVKWLCLNDLP
Sbjct: 108 NSGSVILIFSVNMSGSFQGYAQMMTSIGRGRDNAWSEGTGKSNPWGRSFKVKWLCLNDLP 167

Query: 229 FHKTLHLKNPLNEYKPVKISRDCQELSPDIGLALCELLDGKND 357
           FHKTLHLKNPLN+YKPVKISRDCQELSPDIGLALC+LLDGKND
Sbjct: 168 FHKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCKLLDGKND 210


>ref|XP_002275532.2| PREDICTED: uncharacterized protein LOC100254803 [Vitis vinifera]
          Length = 404

 Score =  185 bits (469), Expect = 4e-45
 Identities = 88/104 (84%), Positives = 94/104 (90%)
 Frame = +1

Query: 49  NSGSVILIFSVNMSGSFQGYAQMMSSIGYRRDNVWSDRSGKSNPWGRSFKVKWLCLNDLP 228
           NSG VILIFSVNMSG FQGYAQMMSS+G+RRDNVWS  SG +NPWGRSFKVKWL L+DLP
Sbjct: 108 NSGKVILIFSVNMSGFFQGYAQMMSSVGWRRDNVWSQGSGGNNPWGRSFKVKWLRLHDLP 167

Query: 229 FHKTLHLKNPLNEYKPVKISRDCQELSPDIGLALCELLDGKNDV 360
           F KTLHLKNPLN+YKPVKISRDCQELS +IG ALCELLDGK DV
Sbjct: 168 FQKTLHLKNPLNDYKPVKISRDCQELSQEIGEALCELLDGKTDV 211


>emb|CBI34780.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  185 bits (469), Expect = 4e-45
 Identities = 88/104 (84%), Positives = 94/104 (90%)
 Frame = +1

Query: 49  NSGSVILIFSVNMSGSFQGYAQMMSSIGYRRDNVWSDRSGKSNPWGRSFKVKWLCLNDLP 228
           NSG VILIFSVNMSG FQGYAQMMSS+G+RRDNVWS  SG +NPWGRSFKVKWL L+DLP
Sbjct: 108 NSGKVILIFSVNMSGFFQGYAQMMSSVGWRRDNVWSQGSGGNNPWGRSFKVKWLRLHDLP 167

Query: 229 FHKTLHLKNPLNEYKPVKISRDCQELSPDIGLALCELLDGKNDV 360
           F KTLHLKNPLN+YKPVKISRDCQELS +IG ALCELLDGK DV
Sbjct: 168 FQKTLHLKNPLNDYKPVKISRDCQELSQEIGEALCELLDGKTDV 211


>ref|XP_002298082.1| predicted protein [Populus trichocarpa] gi|222845340|gb|EEE82887.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  182 bits (463), Expect = 2e-44
 Identities = 90/122 (73%), Positives = 101/122 (82%), Gaps = 3/122 (2%)
 Frame = +1

Query: 1   NGIK*TSLR---IICMFLQNSGSVILIFSVNMSGSFQGYAQMMSSIGYRRDNVWSDRSGK 171
           NGI  T +R   I+     NSG VILI+SVNMSG FQGYAQM+SS+G+R DN+WS+ SGK
Sbjct: 87  NGIWATQVRNEPILEEAFHNSGRVILIYSVNMSGFFQGYAQMISSVGWRHDNLWSEGSGK 146

Query: 172 SNPWGRSFKVKWLCLNDLPFHKTLHLKNPLNEYKPVKISRDCQELSPDIGLALCELLDGK 351
           SNPWGRSFKVKWL LNDLPF KTLHLKNPLN+YKPVKISRDCQEL  DIG ALCEL+DG+
Sbjct: 147 SNPWGRSFKVKWLRLNDLPFQKTLHLKNPLNDYKPVKISRDCQELPEDIGEALCELIDGE 206

Query: 352 ND 357
            D
Sbjct: 207 RD 208


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